Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GGTA1P (-)

Identity

Alias_namesGLYT2
GGTA
GGTA1
glycoprotein, alpha-galactosyltransferase 1
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 2681
Atlas_Id 40710
Location 9q33.2  [Link to chromosome band 9q33]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)GGTA1P  2681  -
Aliases
GeneCards (Weizmann)GGTA1P
Ensembl hg19 (Hinxton)ENSG00000204136 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204136 [Gene_View]  ENSG00000204136 [Sequence]  - [Contig_View]  GGTA1P [Vega]
ICGC DataPortalENSG00000204136
TCGA cBioPortalGGTA1P
AceView (NCBI)GGTA1P
Genatlas (Paris)GGTA1P
WikiGenes2681
SOURCE (Princeton)GGTA1P
Genetics Home Reference (NIH)GGTA1P
Genomic and cartography
GoldenPath hg38 (UCSC)GGTA1P  -  
GoldenPath hg19 (UCSC)GGTA1P  -  
GoldenPathGGTA1P - [CytoView hg19]  GGTA1P - [CytoView hg38]
Genome Data Viewer NCBIGGTA1P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GGTA1P
Alternative Splicing GalleryENSG00000204136
Gene ExpressionGGTA1P [ NCBI-GEO ]   GGTA1P [ EBI - ARRAY_EXPRESS ]   GGTA1P [ SEEK ]   GGTA1P [ MEM ]
Gene Expression Viewer (FireBrowse)GGTA1P [ Firebrowse - Broad ]
GenevisibleExpression of GGTA1P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2681
GTEX Portal (Tissue expression)GGTA1P
Human Protein AtlasENSG00000204136-GGTA1P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GGTA1P
DMDM Disease mutations2681
Human Protein Atlas [tissue]ENSG00000204136-GGTA1P [tissue]
IPIIPI00641358   
Protein Interaction databases
FunCoupENSG00000204136
BioGRIDGGTA1P
STRING (EMBL)GGTA1P
ZODIACGGTA1P
Ontologies - Pathways
snp3D : Map Gene to Disease2681
BioCentury BCIQGGTA1P
ClinGenGGTA1P
Clinical trials, drugs, therapy
Protein Interactions : CTD2681
Pharm GKB GenePA28666
Clinical trialGGTA1P
Miscellaneous
canSAR (ICR)GGTA1P (select the gene name)
HarmonizomeGGTA1P
DataMed IndexGGTA1P
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineGGTA1P
EVEXGGTA1P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 11 19:50:14 CEST 2020

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