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GMDS-DT (GMDS divergent transcript)

Identity

Other aliasGMDS-AS1
HGNC (Hugo) GMDS-DT
LocusID (NCBI) 100508120
Atlas_Id 80437
Location 6p25.3  [Link to chromosome band 6p25]
Location_base_pair Starts at 2245753 and ends at 2413591 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GMDS-DT   48993
Cards
Entrez_Gene (NCBI)GMDS-DT  100508120  GMDS divergent transcript
AliasesGMDS-AS1
GeneCards (Weizmann)GMDS-DT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:2245753-2413591 [Contig_View]  GMDS-DT [Vega]
TCGA cBioPortalGMDS-DT
AceView (NCBI)GMDS-DT
Genatlas (Paris)GMDS-DT
WikiGenes100508120
SOURCE (Princeton)GMDS-DT
Genetics Home Reference (NIH)GMDS-DT
Genomic and cartography
GoldenPath hg38 (UCSC)GMDS-DT  -     chr6:2245753-2413591 +  6p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GMDS-DT  -     6p25.3   [Description]    (hg19-Feb_2009)
GoldenPathGMDS-DT - 6p25.3 [CytoView hg19]  GMDS-DT - 6p25.3 [CytoView hg38]
Mapping of homologs : NCBIGMDS-DT [Mapview hg19]  GMDS-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023629 BX342557 CA413374 CN395927 CR739457
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GMDS-DT
Cluster EST : UnigeneHs.188825 [ NCBI ]
CGAP (NCI)Hs.188825
Gene ExpressionGMDS-DT [ NCBI-GEO ]   GMDS-DT [ EBI - ARRAY_EXPRESS ]   GMDS-DT [ SEEK ]   GMDS-DT [ MEM ]
Gene Expression Viewer (FireBrowse)GMDS-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100508120
GTEX Portal (Tissue expression)GMDS-DT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GMDS-DT
DMDM Disease mutations100508120
Blocks (Seattle)GMDS-DT
Protein Interaction databases
BioGRIDGMDS-DT
STRING (EMBL)GMDS-DT
ZODIACGMDS-DT
Ontologies - Pathways
Huge Navigator GMDS-DT [HugePedia]
snp3D : Map Gene to Disease100508120
BioCentury BCIQGMDS-DT
ClinGenGMDS-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100508120
Clinical trialGMDS-DT
Miscellaneous
canSAR (ICR)GMDS-DT (select the gene name)
DataMed IndexGMDS-DT
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGMDS-DT
EVEXGMDS-DT
GoPubMedGMDS-DT
iHOPGMDS-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:29:51 CEST 2019

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