| Nomenclature |
|---|
| HGNC (Hugo) | GMEB1 4370 |
| Cards |
|---|
| Entrez_Gene (NCBI) | GMEB1 10691 glucocorticoid modulatory element binding protein 1 |
| Aliases | P96PIF; PIF96 |
| GeneCards (Weizmann) | GMEB1 |
| Ensembl hg19 (Hinxton) | ENSG00000162419 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000162419 [Gene_View] ENSG00000162419 [Sequence] chr1:28668728-28715603 [Contig_View] GMEB1 [Vega] |
| ICGC DataPortal | ENSG00000162419 |
| TCGA cBioPortal | GMEB1 |
| AceView (NCBI) | GMEB1 |
| Genatlas (Paris) | GMEB1 |
| WikiGenes | 10691 |
| SOURCE (Princeton) | GMEB1 |
| Genetics Home Reference (NIH) | GMEB1 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | GMEB1 - chr1:28668728-28715603 + 1p35.3 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | GMEB1 - 1p35.3 [Description] (hg19-Feb_2009) |
| GoldenPath | GMEB1 - 1p35.3 [CytoView hg19] GMEB1 - 1p35.3 [CytoView hg38] |
| ImmunoBase | ENSG00000162419 |
| Mapping of homologs : NCBI | GMEB1 [Mapview hg19] GMEB1 [Mapview hg38] |
| OMIM | 604409 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AF099013 AF173868 AF203694 AK000892 AK023126 |
| RefSeq transcript (Entrez) | NM_001319674 NM_006582 NM_024482 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | GMEB1 |
| Cluster EST : Unigene | Hs.632373 [ NCBI ] |
| CGAP (NCI) | Hs.632373 |
| Alternative Splicing Gallery | ENSG00000162419 |
| Gene Expression | GMEB1 [ NCBI-GEO ] GMEB1 [ EBI - ARRAY_EXPRESS ]
GMEB1 [ SEEK ] GMEB1 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | GMEB1 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 10691 |
| GTEX Portal (Tissue expression) | GMEB1 |
| Human Protein Atlas | ENSG00000162419-GMEB1 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q9Y692 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q9Y692 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q9Y692 |
| Splice isoforms : SwissVar | Q9Y692 |
| PhosPhoSitePlus | Q9Y692 |
| Domaine pattern : Prosite (Expaxy) | SAND (PS50864) |
| Domains : Interpro (EBI) | GMEB1/2 SAND-like_dom_sf SAND_dom |
| Domain families : Pfam (Sanger) | SAND (PF01342) |
| Domain families : Pfam (NCBI) | pfam01342 |
| Domain families : Smart (EMBL) | SAND (SM00258) |
| Conserved Domain (NCBI) | GMEB1 |
| DMDM Disease mutations | 10691 |
| Blocks (Seattle) | GMEB1 |
| PDB (RSDB) | 1OQJ |
| PDB Europe | 1OQJ |
| PDB (PDBSum) | 1OQJ |
| PDB (IMB) | 1OQJ |
| Structural Biology KnowledgeBase | 1OQJ |
| SCOP (Structural Classification of Proteins) | 1OQJ |
| CATH (Classification of proteins structures) | 1OQJ |
| Superfamily | Q9Y692 |
| Human Protein Atlas [tissue] | ENSG00000162419-GMEB1 [tissue] |
| Peptide Atlas | Q9Y692 |
| HPRD | 16059 |
| IPI | IPI00008601 IPI00215883 IPI00641457 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q9Y692 |
| IntAct (EBI) | Q9Y692 |
| FunCoup | ENSG00000162419 |
| BioGRID | GMEB1 |
| STRING (EMBL) | GMEB1 |
| ZODIAC | GMEB1 |
| Ontologies - Pathways |
|---|
| QuickGO | Q9Y692 |
| Ontology : AmiGO | RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific transcription coactivator activity nucleus nucleoplasm cytoplasm regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II metal ion binding |
| Ontology : EGO-EBI | RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific transcription coactivator activity nucleus nucleoplasm cytoplasm regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II metal ion binding |
| NDEx Network | GMEB1 |
| Atlas of Cancer Signalling Network | GMEB1 |
| Wikipedia pathways | GMEB1 |
| Orthology - Evolution |
|---|
| OrthoDB | 10691 |
| GeneTree (enSembl) | ENSG00000162419 |
| Phylogenetic Trees/Animal Genes : TreeFam | GMEB1 |
| HOGENOM | Q9Y692 |
| Homologs : HomoloGene | GMEB1 |
| Homology/Alignments : Family Browser (UCSC) | GMEB1 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Quiver | GMEB1 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | GMEB1 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | GMEB1 |
| dbVar | GMEB1 |
| ClinVar | GMEB1 |
| 1000_Genomes | GMEB1 |
| Exome Variant Server | GMEB1 |
| ExAC (Exome Aggregation Consortium) | ENSG00000162419 |
| GNOMAD Browser | ENSG00000162419 |
| Varsome Browser | GMEB1 |
| Genetic variants : HAPMAP | 10691 |
| Genomic Variants (DGV) | GMEB1 [DGVbeta] |
| DECIPHER | GMEB1 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | GMEB1 |
| Mutations |
|---|
| ICGC Data Portal | GMEB1 |
| TCGA Data Portal | GMEB1 |
| Broad Tumor Portal | GMEB1 |
| OASIS Portal | GMEB1 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | GMEB1 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | GMEB1 |
| Mutations and Diseases : HGMD | GMEB1 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search GMEB1 |
| DgiDB (Drug Gene Interaction Database) | GMEB1 |
| DoCM (Curated mutations) | GMEB1 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | GMEB1 (select a term) |
| intoGen | GMEB1 |
| Cancer3D | GMEB1(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 604409 |
| Orphanet | |
| DisGeNET | GMEB1 |
| Medgen | GMEB1 |
| Genetic Testing Registry | GMEB1
|
| NextProt | Q9Y692 [Medical] |
| TSGene | 10691 |
| GENETests | GMEB1 |
| Target Validation | GMEB1 |
| Huge Navigator |
GMEB1 [HugePedia] |
| snp3D : Map Gene to Disease | 10691 |
| BioCentury BCIQ | GMEB1 |
| ClinGen | GMEB1 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 10691 |
| Chemical/Pharm GKB Gene | PA28755 |
| Clinical trial | GMEB1 |
| Miscellaneous |
|---|
| canSAR (ICR) | GMEB1 (select the gene name) |
| DataMed Index | GMEB1 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 27 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | GMEB1 |
| EVEX | GMEB1 |
| GoPubMed | GMEB1 |
| iHOP | GMEB1 |
