Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GOLGA2P3Y (GOLGA2 pseudogene 3 Y-linked)

Identity

Alias_namesGOLGA2LY2
GOLGA2P3
golgi autoantigen, golgin subfamily a, 2-like, Y-linked 2
golgin A2 pseudogene 3
Other alias
HGNC (Hugo) GOLGA2P3Y
LocusID (NCBI) 401634
Atlas_Id 63872
Location Yq11.23  [Link to chromosome band Yq11]
Location_base_pair Starts at 24209967 and ends at 24214831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GOLGA2P3Y   32426
Cards
Entrez_Gene (NCBI)GOLGA2P3Y  401634  GOLGA2 pseudogene 3 Y-linked
AliasesGOLGA2LY2; GOLGA2P3
GeneCards (Weizmann)GOLGA2P3Y
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrY:24209967-24214831 [Contig_View]  GOLGA2P3Y [Vega]
TCGA cBioPortalGOLGA2P3Y
AceView (NCBI)GOLGA2P3Y
Genatlas (Paris)GOLGA2P3Y
WikiGenes401634
SOURCE (Princeton)GOLGA2P3Y
Genetics Home Reference (NIH)GOLGA2P3Y
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA2P3Y  -     chrY:24209967-24214831 -  Yq11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA2P3Y  -     Yq11.23   [Description]    (hg19-Feb_2009)
GoldenPathGOLGA2P3Y - Yq11.23 [CytoView hg19]  GOLGA2P3Y - Yq11.23 [CytoView hg38]
Mapping of homologs : NCBIGOLGA2P3Y [Mapview hg19]  GOLGA2P3Y [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF332229
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA2P3Y
Cluster EST : UnigeneHs.531603 [ NCBI ]
CGAP (NCI)Hs.531603
Gene ExpressionGOLGA2P3Y [ NCBI-GEO ]   GOLGA2P3Y [ EBI - ARRAY_EXPRESS ]   GOLGA2P3Y [ SEEK ]   GOLGA2P3Y [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA2P3Y [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401634
GTEX Portal (Tissue expression)GOLGA2P3Y
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLGA2P3Y
DMDM Disease mutations401634
Blocks (Seattle)GOLGA2P3Y
IPIIPI00256531   
Protein Interaction databases
BioGRIDGOLGA2P3Y
STRING (EMBL)GOLGA2P3Y
ZODIACGOLGA2P3Y
Ontologies - Pathways
Huge Navigator GOLGA2P3Y [HugePedia]
snp3D : Map Gene to Disease401634
BioCentury BCIQGOLGA2P3Y
ClinGenGOLGA2P3Y
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401634
Chemical/Pharm GKB GenePA142671725
Clinical trialGOLGA2P3Y
Miscellaneous
canSAR (ICR)GOLGA2P3Y (select the gene name)
DataMed IndexGOLGA2P3Y
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA2P3Y
EVEXGOLGA2P3Y
GoPubMedGOLGA2P3Y
iHOPGOLGA2P3Y
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:29:54 CEST 2019
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