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GOLGA8O (golgin A8 family member O)

Identity

Alias_namesgolgin A8 family, member O
Other alias-
HGNC (Hugo) GOLGA8O
LocusID (NCBI) 728047
Atlas_Id 63903
Location 15q13.3  [Link to chromosome band 15q13]
Location_base_pair Starts at 32441914 and ends at 32455634 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8O   44406
Cards
Entrez_Gene (NCBI)GOLGA8O  728047  golgin A8 family member O
Aliases
GeneCards (Weizmann)GOLGA8O
Ensembl hg19 (Hinxton)ENSG00000206127 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206127 [Gene_View]  ENSG00000206127 [Sequence]  chr15:32441914-32455634 [Contig_View]  GOLGA8O [Vega]
ICGC DataPortalENSG00000206127
TCGA cBioPortalGOLGA8O
AceView (NCBI)GOLGA8O
Genatlas (Paris)GOLGA8O
WikiGenes728047
SOURCE (Princeton)GOLGA8O
Genetics Home Reference (NIH)GOLGA8O
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8O  -     chr15:32441914-32455634 -  15q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8O  -     15q13.3   [Description]    (hg19-Feb_2009)
GoldenPathGOLGA8O - 15q13.3 [CytoView hg19]  GOLGA8O - 15q13.3 [CytoView hg38]
ImmunoBaseENSG00000206127
Mapping of homologs : NCBIGOLGA8O [Mapview hg19]  GOLGA8O [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ477899 DB068178
RefSeq transcript (Entrez)NM_001277308
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA8O
Cluster EST : UnigeneHs.672754 [ NCBI ]
CGAP (NCI)Hs.672754
Alternative Splicing GalleryENSG00000206127
Gene ExpressionGOLGA8O [ NCBI-GEO ]   GOLGA8O [ EBI - ARRAY_EXPRESS ]   GOLGA8O [ SEEK ]   GOLGA8O [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8O [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728047
GTEX Portal (Tissue expression)GOLGA8O
Human Protein AtlasENSG00000206127-GOLGA8O [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCC3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCC3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCC3
Splice isoforms : SwissVarA6NCC3
PhosPhoSitePlusA6NCC3
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8O
DMDM Disease mutations728047
Blocks (Seattle)GOLGA8O
SuperfamilyA6NCC3
Human Protein Atlas [tissue]ENSG00000206127-GOLGA8O [tissue]
Peptide AtlasA6NCC3
IPIIPI00479557   IPI00786988   IPI00982728   IPI00966593   
Protein Interaction databases
DIP (DOE-UCLA)A6NCC3
IntAct (EBI)A6NCC3
FunCoupENSG00000206127
BioGRIDGOLGA8O
STRING (EMBL)GOLGA8O
ZODIACGOLGA8O
Ontologies - Pathways
QuickGOA6NCC3
Ontology : AmiGOGolgi cis cisterna  protein binding  Golgi apparatus  cis-Golgi network  Golgi organization  Golgi cisterna membrane  spindle assembly  
Ontology : EGO-EBIGolgi cis cisterna  protein binding  Golgi apparatus  cis-Golgi network  Golgi organization  Golgi cisterna membrane  spindle assembly  
NDEx NetworkGOLGA8O
Atlas of Cancer Signalling NetworkGOLGA8O
Wikipedia pathwaysGOLGA8O
Orthology - Evolution
OrthoDB728047
GeneTree (enSembl)ENSG00000206127
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8O
HOGENOMA6NCC3
Homologs : HomoloGeneGOLGA8O
Homology/Alignments : Family Browser (UCSC)GOLGA8O
Gene fusions - Rearrangements
Fusion : QuiverGOLGA8O
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8O [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8O
dbVarGOLGA8O
ClinVarGOLGA8O
1000_GenomesGOLGA8O 
Exome Variant ServerGOLGA8O
ExAC (Exome Aggregation Consortium)ENSG00000206127
GNOMAD BrowserENSG00000206127
Varsome BrowserGOLGA8O
Genetic variants : HAPMAP728047
Genomic Variants (DGV)GOLGA8O [DGVbeta]
DECIPHERGOLGA8O [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8O 
Mutations
ICGC Data PortalGOLGA8O 
TCGA Data PortalGOLGA8O 
Broad Tumor PortalGOLGA8O
OASIS PortalGOLGA8O [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8O  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DGOLGA8O
Mutations and Diseases : HGMDGOLGA8O
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA8O
DgiDB (Drug Gene Interaction Database)GOLGA8O
DoCM (Curated mutations)GOLGA8O (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8O (select a term)
intoGenGOLGA8O
Cancer3DGOLGA8O(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETGOLGA8O
MedgenGOLGA8O
Genetic Testing Registry GOLGA8O
NextProtA6NCC3 [Medical]
TSGene728047
GENETestsGOLGA8O
Target ValidationGOLGA8O
Huge Navigator GOLGA8O [HugePedia]
snp3D : Map Gene to Disease728047
BioCentury BCIQGOLGA8O
ClinGenGOLGA8O
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728047
Chemical/Pharm GKB GenePA166049126
Clinical trialGOLGA8O
Miscellaneous
canSAR (ICR)GOLGA8O (select the gene name)
DataMed IndexGOLGA8O
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8O
EVEXGOLGA8O
GoPubMedGOLGA8O
iHOPGOLGA8O
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Sep 3 15:30:00 CEST 2019

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