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GPRACR (GPR107 adjacent cis regulating lncRNA)

Identity

Alias_symbol (synonym)LncGPR107
Other alias
HGNC (Hugo) GPRACR
LocusID (NCBI) 401554
Atlas_Id 57992
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 130140610 and ends at 130144219 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GPRACR   53957
Cards
Entrez_Gene (NCBI)GPRACR  401554  GPR107 adjacent cis regulating lncRNA
AliasesLncGPR107
GeneCards (Weizmann)GPRACR
Ensembl hg19 (Hinxton)ENSG00000196979 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196979 [Gene_View]  ENSG00000196979 [Sequence]  chr9:130140610-130144219 [Contig_View]  GPRACR [Vega]
ICGC DataPortalENSG00000196979
TCGA cBioPortalGPRACR
AceView (NCBI)GPRACR
Genatlas (Paris)GPRACR
WikiGenes401554
SOURCE (Princeton)GPRACR
Genetics Home Reference (NIH)GPRACR
Genomic and cartography
GoldenPath hg38 (UCSC)GPRACR  -     chr9:130140610-130144219 -  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPRACR  -     9q34.11   [Description]    (hg19-Feb_2009)
GoldenPathGPRACR - 9q34.11 [CytoView hg19]  GPRACR - 9q34.11 [CytoView hg38]
ImmunoBaseENSG00000196979
Mapping of homologs : NCBIGPRACR [Mapview hg19]  GPRACR [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128673 BC132936
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPRACR
Cluster EST : UnigeneHs.522437 [ NCBI ]
CGAP (NCI)Hs.522437
Alternative Splicing GalleryENSG00000196979
Gene ExpressionGPRACR [ NCBI-GEO ]   GPRACR [ EBI - ARRAY_EXPRESS ]   GPRACR [ SEEK ]   GPRACR [ MEM ]
Gene Expression Viewer (FireBrowse)GPRACR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401554
GTEX Portal (Tissue expression)GPRACR
Human Protein AtlasENSG00000196979-GPRACR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GPRACR
DMDM Disease mutations401554
Blocks (Seattle)GPRACR
Human Protein Atlas [tissue]ENSG00000196979-GPRACR [tissue]
IPIIPI00410567   
Protein Interaction databases
FunCoupENSG00000196979
BioGRIDGPRACR
STRING (EMBL)GPRACR
ZODIACGPRACR
Ontologies - Pathways
Huge Navigator GPRACR [HugePedia]
snp3D : Map Gene to Disease401554
BioCentury BCIQGPRACR
ClinGenGPRACR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401554
Clinical trialGPRACR
Miscellaneous
canSAR (ICR)GPRACR (select the gene name)
DataMed IndexGPRACR
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPRACR
EVEXGPRACR
GoPubMedGPRACR
iHOPGPRACR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Nov 13 17:45:35 CET 2019

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