GTF3C4 (general transcription factor IIIC subunit 4)

2014-11-01 Affiliation

Identity

HGNC

GTF3C4

LOCATION

9q34.13

LOCUSID

9329

ALIAS

KAT12,TF3C-delta,TFIII90,TFIIIC290,TFIIIC90,TFIIICDELTA

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 9329
MIM: 604892
HGNC: 4667
Ensembl: ENSG00000125484

Variants:

dbSNP: 9329
ClinVar: 9329
TCGA: ENSG00000125484
COSMIC: GTF3C4

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000125484	ENST00000372146	Q9UKN8
ENSG00000125484	ENST00000483873	F2Z356

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Gene Expression	REACTOME	R-HSA-74160
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription	REACTOME	R-HSA-504046
RNA Polymerase III Transcription	REACTOME	R-HSA-74158
RNA Polymerase III Abortive And Retractive Initiation	REACTOME	R-HSA-749476
RNA Polymerase III Transcription Initiation	REACTOME	R-HSA-76046
RNA Polymerase III Transcription Initiation From Type 1 Promoter	REACTOME	R-HSA-76061
RNA Polymerase III Transcription Initiation From Type 2 Promoter	REACTOME	R-HSA-76066

References

Pubmed ID	Year	Title	Citations
20487506	2010	A whole genome association study of mother-to-child transmission of HIV in Malawi.	26

Citation

Dessen P

GTF3C4 (general transcription factor IIIC subunit 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64098/gtf3c4