Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GXYLT1P3 (glucoside xylosyltransferase 1 pseudogene 3)

Identity

Other alias-
HGNC (Hugo) GXYLT1P3
LocusID (NCBI) 100132541
Atlas_Id 64131
Location 9p11.2  [Link to chromosome band 9p11]
Location_base_pair Starts at 40348499 and ends at 40353658 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GXYLT1P3   50422
Cards
Entrez_Gene (NCBI)GXYLT1P3  100132541  glucoside xylosyltransferase 1 pseudogene 3
Aliases
GeneCards (Weizmann)GXYLT1P3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr9:40348499-40353658 [Contig_View]  GXYLT1P3 [Vega]
TCGA cBioPortalGXYLT1P3
AceView (NCBI)GXYLT1P3
Genatlas (Paris)GXYLT1P3
WikiGenes100132541
SOURCE (Princeton)GXYLT1P3
Genetics Home Reference (NIH)GXYLT1P3
Genomic and cartography
GoldenPath hg38 (UCSC)GXYLT1P3  -     chr9:40348499-40353658 +  9p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GXYLT1P3  -     9p11.2   [Description]    (hg19-Feb_2009)
GoldenPathGXYLT1P3 - 9p11.2 [CytoView hg19]  GXYLT1P3 - 9p11.2 [CytoView hg38]
Mapping of homologs : NCBIGXYLT1P3 [Mapview hg19]  GXYLT1P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA103059 DQ786188
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GXYLT1P3
Cluster EST : UnigeneHs.648146 [ NCBI ]
CGAP (NCI)Hs.648146
Gene ExpressionGXYLT1P3 [ NCBI-GEO ]   GXYLT1P3 [ EBI - ARRAY_EXPRESS ]   GXYLT1P3 [ SEEK ]   GXYLT1P3 [ MEM ]
Gene Expression Viewer (FireBrowse)GXYLT1P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132541
GTEX Portal (Tissue expression)GXYLT1P3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GXYLT1P3
DMDM Disease mutations100132541
Blocks (Seattle)GXYLT1P3
Protein Interaction databases
BioGRIDGXYLT1P3
STRING (EMBL)GXYLT1P3
ZODIACGXYLT1P3
Ontologies - Pathways
Huge Navigator GXYLT1P3 [HugePedia]
snp3D : Map Gene to Disease100132541
BioCentury BCIQGXYLT1P3
ClinGenGXYLT1P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132541
Clinical trialGXYLT1P3
Miscellaneous
canSAR (ICR)GXYLT1P3 (select the gene name)
DataMed IndexGXYLT1P3
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGXYLT1P3
EVEXGXYLT1P3
GoPubMedGXYLT1P3
iHOPGXYLT1P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:30:39 CEST 2019
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