Atlas of Genetics and Cytogenetics in Oncology and Haematology

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HAUS8 (HAUS augmin like complex subunit 8)

Identity

Alias_namesHICE1
HEC1/NDC80 interacting, centrosome associated 1
Alias_symbol (synonym)MGC20533
NY-SAR-48
Other aliasDGT4
HGNC (Hugo) HAUS8
LocusID (NCBI) 93323
Atlas_Id 43035
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 17049761 and ends at 17075533 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CPAMD8 (19p13.11) / HAUS8 (19p13.11)HAUS8 (19p13.11) / C19orf57 (19p13.13)HAUS8 (19p13.11) / FAF1 (1p32.3)
HAUS8 (19p13.11) / SGTA (19p13.3)CPAMD8 19p13.11 / HAUS8 19p13.11HAUS8 19p13.11 / C19orf57 19p13.13
HAUS8 19p13.11 / SGTA 19p13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 4 ]
  CPAMD8/HAUS8 (19p13)
FKBP8/HAUS8 (19p13)
HAUS8/C19orf57 (19p13)
HAUS8/SGTA (19p13)

External links

Nomenclature
HGNC (Hugo)HAUS8   30532
Cards
Entrez_Gene (NCBI)HAUS8  93323  HAUS augmin like complex subunit 8
AliasesDGT4; HICE1; NY-SAR-48
GeneCards (Weizmann)HAUS8
Ensembl hg19 (Hinxton)ENSG00000131351 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131351 [Gene_View]  ENSG00000131351 [Sequence]  chr19:17049761-17075533 [Contig_View]  HAUS8 [Vega]
ICGC DataPortalENSG00000131351
TCGA cBioPortalHAUS8
AceView (NCBI)HAUS8
Genatlas (Paris)HAUS8
WikiGenes93323
SOURCE (Princeton)HAUS8
Genetics Home Reference (NIH)HAUS8
Genomic and cartography
GoldenPath hg38 (UCSC)HAUS8  -     chr19:17049761-17075533 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HAUS8  -     19p13.11   [Description]    (hg19-Feb_2009)
GoldenPathHAUS8 - 19p13.11 [CytoView hg19]  HAUS8 - 19p13.11 [CytoView hg38]
ImmunoBaseENSG00000131351
Mapping of homologs : NCBIHAUS8 [Mapview hg19]  HAUS8 [Mapview hg38]
OMIM613434   
Gene and transcription
Genbank (Entrez)AK295994 AY211919 BC004398 BC010176 BC040564
RefSeq transcript (Entrez)NM_001011699 NM_033417
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HAUS8
Cluster EST : UnigeneHs.404088 [ NCBI ]
CGAP (NCI)Hs.404088
Alternative Splicing GalleryENSG00000131351
Gene ExpressionHAUS8 [ NCBI-GEO ]   HAUS8 [ EBI - ARRAY_EXPRESS ]   HAUS8 [ SEEK ]   HAUS8 [ MEM ]
Gene Expression Viewer (FireBrowse)HAUS8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93323
GTEX Portal (Tissue expression)HAUS8
Human Protein AtlasENSG00000131351-HAUS8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BT25   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BT25  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BT25
Splice isoforms : SwissVarQ9BT25
PhosPhoSitePlusQ9BT25
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAUS8
DMDM Disease mutations93323
Blocks (Seattle)HAUS8
SuperfamilyQ9BT25
Human Protein Atlas [tissue]ENSG00000131351-HAUS8 [tissue]
Peptide AtlasQ9BT25
HPRD11318
IPIIPI00305490   IPI00885183   IPI00552122   
Protein Interaction databases
DIP (DOE-UCLA)Q9BT25
IntAct (EBI)Q9BT25
FunCoupENSG00000131351
BioGRIDHAUS8
STRING (EMBL)HAUS8
ZODIACHAUS8
Ontologies - Pathways
QuickGOQ9BT25
Ontology : AmiGOG2/M transition of mitotic cell cycle  spindle pole  molecular_function  protein binding  cytoplasm  centrosome  centrosome  cytosol  nuclear microtubule  centrosome cycle  centrosome cycle  regulation of G2/M transition of mitotic cell cycle  spindle assembly  spindle assembly  cell division  HAUS complex  ciliary basal body-plasma membrane docking  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  spindle pole  molecular_function  protein binding  cytoplasm  centrosome  centrosome  cytosol  nuclear microtubule  centrosome cycle  centrosome cycle  regulation of G2/M transition of mitotic cell cycle  spindle assembly  spindle assembly  cell division  HAUS complex  ciliary basal body-plasma membrane docking  
NDEx NetworkHAUS8
Atlas of Cancer Signalling NetworkHAUS8
Wikipedia pathwaysHAUS8
Orthology - Evolution
OrthoDB93323
GeneTree (enSembl)ENSG00000131351
Phylogenetic Trees/Animal Genes : TreeFamHAUS8
HOGENOMQ9BT25
Homologs : HomoloGeneHAUS8
Homology/Alignments : Family Browser (UCSC)HAUS8
Gene fusions - Rearrangements
Fusion : MitelmanCPAMD8/HAUS8 [19p13.11/19p13.11]  [t(19;19)(p13;p13)]  
Fusion : MitelmanHAUS8/C19orf57 [19p13.11/19p13.13]  [t(19;19)(p13;p13)]  
Fusion : MitelmanHAUS8/SGTA [19p13.11/19p13.3]  [t(19;19)(p13;p13)]  
Fusion PortalCPAMD8 19p13.11 HAUS8 19p13.11 BRCA
Fusion PortalHAUS8 19p13.11 C19orf57 19p13.13 BRCA
Fusion PortalHAUS8 19p13.11 SGTA 19p13.3 PRAD
Fusion : QuiverHAUS8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHAUS8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HAUS8
dbVarHAUS8
ClinVarHAUS8
1000_GenomesHAUS8 
Exome Variant ServerHAUS8
ExAC (Exome Aggregation Consortium)ENSG00000131351
GNOMAD BrowserENSG00000131351
Varsome BrowserHAUS8
Genetic variants : HAPMAP93323
Genomic Variants (DGV)HAUS8 [DGVbeta]
DECIPHERHAUS8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHAUS8 
Mutations
ICGC Data PortalHAUS8 
TCGA Data PortalHAUS8 
Broad Tumor PortalHAUS8
OASIS PortalHAUS8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHAUS8  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DHAUS8
Mutations and Diseases : HGMDHAUS8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HAUS8
DgiDB (Drug Gene Interaction Database)HAUS8
DoCM (Curated mutations)HAUS8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HAUS8 (select a term)
intoGenHAUS8
Cancer3DHAUS8(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613434   
Orphanet
DisGeNETHAUS8
MedgenHAUS8
Genetic Testing Registry HAUS8
NextProtQ9BT25 [Medical]
TSGene93323
GENETestsHAUS8
Target ValidationHAUS8
Huge Navigator HAUS8 [HugePedia]
snp3D : Map Gene to Disease93323
BioCentury BCIQHAUS8
ClinGenHAUS8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93323
Chemical/Pharm GKB GenePA165393466
Clinical trialHAUS8
Miscellaneous
canSAR (ICR)HAUS8 (select the gene name)
DataMed IndexHAUS8
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAUS8
EVEXHAUS8
GoPubMedHAUS8
iHOPHAUS8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:46:19 CET 2019
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