HLA-DPB2 (major histocompatibility complex, class II, DP beta 2 (pseudogene))

2014-11-01 Affiliation

Identity

HGNC

HLA-DPB2

LOCATION

6p21.32

LOCUSID

3116

ALIAS

DP2B,DPB2,DPbeta2,HLA-DP2B

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 3116
HGNC: 4941
Ensembl: ENSG00000224557

Variants:

dbSNP: 3116
ClinVar: 3116
TCGA: ENSG00000224557
COSMIC: HLA-DPB2

RNA/Proteins

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

PharmGKB

Entity ID	Name	Type	Evidence	Association	PD
PA131285571	aspirin-induced asthma	Disease	ClinicalAnnotation	associated	PD
PA443450	Asthma	Disease	ClinicalAnnotation	associated	PD
PA448497	aspirin	Chemical	ClinicalAnnotation	associated	PD

References

Pubmed ID	Year	Title	Citations
19950302	2009	HLA-DPB1 and DPB2 are genetic loci for systemic sclerosis: a genome-wide association study in Koreans with replication in North Americans.	33
19950302	2009	HLA-DPB1 and DPB2 are genetic loci for systemic sclerosis: a genome-wide association study in Koreans with replication in North Americans.	33
18682748	2008	Analysis of 17,576 potentially functional SNPs in three case-control studies of myocardial infarction.	11
20587610	2010	Examination of genetic polymorphisms in newborns for signatures of sex-specific prenatal selection.	1

Citation

Dessen P

HLA-DPB2 (major histocompatibility complex, class II, DP beta 2 (pseudogene))

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64330/hla-dpb2