HLA-J (major histocompatibility complex, class I, J (pseudogene))

2014-11-01  

Identity

HGNC
HLA-J
LOCATION
6p22.1
LOCUSID
3137
ALIAS
CDA12,D6S203,HLA-59,HLA-CDA12
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 3137
HGNC: 4967
Ensembl: ENSG00000204622

Variants:

dbSNP: 3137
ClinVar: 3137
TCGA: ENSG00000204622
COSMIC: HLA-J

RNA/Proteins

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
205930132010A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01.20
230836322013Paradoxical downregulation of HLA-A expression by IFNγ associated with schizophrenia and noncoding genes.2

Citation

Dessen P

HLA-J (major histocompatibility complex, class I, J (pseudogene))

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64335/hla-j