HOXD9 (homeobox D9)

2007-02-01  

Identity

HGNC
HOXD9
LOCATION
2q31.1
LOCUSID
3235
ALIAS
HOX4,HOX4C,Hox-4.3,Hox-5.2

Other Information

Locus ID:

NCBI: 3235
MIM: 142982
HGNC: 5140
Ensembl: ENSG00000128709

Variants:

dbSNP: 3235
ClinVar: 3235
TCGA: ENSG00000128709
COSMIC: HOXD9

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000128709ENST00000249499P28356

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
240144272014Epigenome-wide DNA methylation landscape of melanoma progression to brain metastasis reveals aberrations on homeobox D cluster associated with prognosis.53
260757902015Genome-wide significant risk associations for mucinous ovarian carcinoma.39
265142262015HOXD9 promotes epithelial-mesenchymal transition and cancer metastasis by ZEB1 regulation in hepatocellular carcinoma.25
216000392011Functional analysis of HOXD9 in human gliomas and glioma cancer stem cells.24
194532612009High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men.20
117781602002A 117-kb microdeletion removing HOXD9-HOXD13 and EVX2 causes synpolydactyly.19
199380812009Altered transmission of HOX and apoptotic SNPs identify a potential common pathway for clubfoot.14
254898842015Temperature dependence of internal motions of protein side-chain NH3(+) groups: insight into energy barriers for transient breakage of hydrogen bonds.14
157707392005Immunocytochemical detection of HoxD9 and Pbx1 homeodomain protein expression in Chinese esophageal squamous cell carcinomas.7
225203312012Association analysis between HOXD9 genes and the development of developmental dysplasia of the hip in Chinese female Han population.5

Citation

Dessen P

HOXD9 (homeobox D9)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/45767/hoxd9