Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

INE1 (inactivation escape 1)

Identity

Alias_namesinactivation escape 1 (non-protein coding)
Alias_symbol (synonym)NCRNA00010
Other alias
HGNC (Hugo) INE1
LocusID (NCBI) 8552
Atlas_Id 46743
Location Xp11.3  [Link to chromosome band Xp11]
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)INE1   6060
Cards
Entrez_Gene (NCBI)INE1  8552  inactivation escape 1
AliasesNCRNA00010
GeneCards (Weizmann)INE1
Ensembl hg19 (Hinxton)ENSG00000224975 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224975 [Gene_View]  ENSG00000224975 [Sequence]  - [Contig_View]  INE1 [Vega]
ICGC DataPortalENSG00000224975
TCGA cBioPortalINE1
AceView (NCBI)INE1
Genatlas (Paris)INE1
WikiGenes8552
SOURCE (Princeton)INE1
Genetics Home Reference (NIH)INE1
Genomic and cartography
GoldenPath hg38 (UCSC)INE1  -  
GoldenPath hg19 (UCSC)INE1  -  
GoldenPathINE1 - [CytoView hg19]  INE1 - [CytoView hg38]
ImmunoBaseENSG00000224975
Mapping of homologs : NCBIINE1 [Mapview hg19]  INE1 [Mapview hg38]
OMIM300164   
Gene and transcription
Genbank (Entrez)BC069671 BC069696 BC069772 BC112149 BC112175
RefSeq transcript (Entrez)NM_003669
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INE1
Cluster EST : UnigeneHs.657350 [ NCBI ]
CGAP (NCI)Hs.657350
Alternative Splicing GalleryENSG00000224975
Gene ExpressionINE1 [ NCBI-GEO ]   INE1 [ EBI - ARRAY_EXPRESS ]   INE1 [ SEEK ]   INE1 [ MEM ]
Gene Expression Viewer (FireBrowse)INE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8552
GTEX Portal (Tissue expression)INE1
Human Protein AtlasENSG00000224975-INE1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15225   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15225  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15225
Splice isoforms : SwissVarO15225
PhosPhoSitePlusO15225
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)INE1
DMDM Disease mutations8552
Blocks (Seattle)INE1
SuperfamilyO15225
Human Protein Atlas [tissue]ENSG00000224975-INE1 [tissue]
Peptide AtlasO15225
HPRD02158
IPIIPI00005674   IPI00977116   
Protein Interaction databases
DIP (DOE-UCLA)O15225
IntAct (EBI)O15225
FunCoupENSG00000224975
BioGRIDINE1
STRING (EMBL)INE1
ZODIACINE1
Ontologies - Pathways
QuickGOO15225
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkINE1
Atlas of Cancer Signalling NetworkINE1
Wikipedia pathwaysINE1
Orthology - Evolution
OrthoDB8552
GeneTree (enSembl)ENSG00000224975
Phylogenetic Trees/Animal Genes : TreeFamINE1
HOGENOMO15225
Homologs : HomoloGeneINE1
Homology/Alignments : Family Browser (UCSC)INE1
Gene fusions - Rearrangements
Fusion : QuiverINE1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INE1
dbVarINE1
ClinVarINE1
1000_GenomesINE1 
Exome Variant ServerINE1
ExAC (Exome Aggregation Consortium)ENSG00000224975
GNOMAD BrowserENSG00000224975
Varsome BrowserINE1
Genetic variants : HAPMAP8552
Genomic Variants (DGV)INE1 [DGVbeta]
DECIPHERINE1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINE1 
Mutations
ICGC Data PortalINE1 
TCGA Data PortalINE1 
Broad Tumor PortalINE1
OASIS PortalINE1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDINE1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch INE1
DgiDB (Drug Gene Interaction Database)INE1
DoCM (Curated mutations)INE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INE1 (select a term)
intoGenINE1
Cancer3DINE1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300164   
Orphanet
DisGeNETINE1
MedgenINE1
Genetic Testing Registry INE1
NextProtO15225 [Medical]
TSGene8552
GENETestsINE1
Target ValidationINE1
Huge Navigator INE1 [HugePedia]
snp3D : Map Gene to Disease8552
BioCentury BCIQINE1
ClinGenINE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8552
Chemical/Pharm GKB GenePA29870
Clinical trialINE1
Miscellaneous
canSAR (ICR)INE1 (select the gene name)
DataMed IndexINE1
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINE1
EVEXINE1
GoPubMedINE1
iHOPINE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:48:28 CET 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.