Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KDM7A-DT (KDM7A divergent transcript)

Identity

Other aliasJHDM1D-AS1
HGNC (Hugo) KDM7A-DT
LocusID (NCBI) 100134229
Atlas_Id 80582
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 140177261 and ends at 140179640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)KDM7A-DT   48959
Cards
Entrez_Gene (NCBI)KDM7A-DT  100134229  KDM7A divergent transcript
AliasesJHDM1D-AS1
GeneCards (Weizmann)KDM7A-DT
Ensembl hg19 (Hinxton)ENSG00000260231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260231 [Gene_View]  ENSG00000260231 [Sequence]  chr7:140177261-140179640 [Contig_View]  KDM7A-DT [Vega]
ICGC DataPortalENSG00000260231
TCGA cBioPortalKDM7A-DT
AceView (NCBI)KDM7A-DT
Genatlas (Paris)KDM7A-DT
WikiGenes100134229
SOURCE (Princeton)KDM7A-DT
Genetics Home Reference (NIH)KDM7A-DT
Genomic and cartography
GoldenPath hg38 (UCSC)KDM7A-DT  -     chr7:140177261-140179640 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KDM7A-DT  -     7q34   [Description]    (hg19-Feb_2009)
GoldenPathKDM7A-DT - 7q34 [CytoView hg19]  KDM7A-DT - 7q34 [CytoView hg38]
ImmunoBaseENSG00000260231
Mapping of homologs : NCBIKDM7A-DT [Mapview hg19]  KDM7A-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA493421 AK026372 DA585317 DA816865
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KDM7A-DT
Cluster EST : UnigeneHs.634333 [ NCBI ]
CGAP (NCI)Hs.634333
Alternative Splicing GalleryENSG00000260231
Gene ExpressionKDM7A-DT [ NCBI-GEO ]   KDM7A-DT [ EBI - ARRAY_EXPRESS ]   KDM7A-DT [ SEEK ]   KDM7A-DT [ MEM ]
Gene Expression Viewer (FireBrowse)KDM7A-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100134229
GTEX Portal (Tissue expression)KDM7A-DT
Human Protein AtlasENSG00000260231-KDM7A-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KDM7A-DT
DMDM Disease mutations100134229
Blocks (Seattle)KDM7A-DT
Human Protein Atlas [tissue]ENSG00000260231-KDM7A-DT [tissue]
Protein Interaction databases
FunCoupENSG00000260231
BioGRIDKDM7A-DT
STRING (EMBL)KDM7A-DT
ZODIACKDM7A-DT
Ontologies - Pathways
Huge Navigator KDM7A-DT [HugePedia]
snp3D : Map Gene to Disease100134229
BioCentury BCIQKDM7A-DT
ClinGenKDM7A-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100134229
Clinical trialKDM7A-DT
Miscellaneous
canSAR (ICR)KDM7A-DT (select the gene name)
DataMed IndexKDM7A-DT
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKDM7A-DT
EVEXKDM7A-DT
GoPubMedKDM7A-DT
iHOPKDM7A-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:32:42 CEST 2019

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