LHX9 (LIM homeobox 9)

2016-10-01 Affiliation

Identity

HGNC

LHX9

LOCATION

1q31.3

LOCUSID

56956

ALIAS

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 56956
MIM: 606066
HGNC: 14222
Ensembl: ENSG00000143355

Variants:

dbSNP: 56956
ClinVar: 56956
TCGA: ENSG00000143355
COSMIC: LHX9

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000143355	ENST00000367387	Q9NQ69
ENSG00000143355	ENST00000367388	H0Y330
ENSG00000143355	ENST00000367390	Q9NQ69
ENSG00000143355	ENST00000367391	Q9NQ69
ENSG00000143355	ENST00000475727	A0A0C4DGY4
ENSG00000143355	ENST00000561173	H0YL54
ENSG00000143355	ENST00000606127	A0A087X083

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
19545367	2009	Transcriptional control of axonal guidance and sorting in dorsal interneurons by the Lim-HD proteins Lhx9 and Lhx1.	39
19568415	2009	Aberrant methylation and reduced expression of LHX9 in malignant gliomas of childhood.	12
29565736	2018	Smad ubiquitylation regulatory factor 1 promotes LIM-homeobox gene 9 degradation and represses testosterone production in Leydig cells.	2

Citation

Dessen P

LHX9 (LIM homeobox 9)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56597/lhx9