LINC00251 (long intergenic non-protein coding RNA 251)

2014-11-01  

Identity

HGNC
LINC00251
LOCATION
8q13.1
LOCUSID
552859
ALIAS
C8orf25,NCRNA00251

Other Information

Locus ID:

NCBI: 552859
HGNC: 31950
Ensembl: ENSG00000280725

Variants:

dbSNP: 552859
ClinVar: 552859
TCGA: ENSG00000280725
COSMIC: LINC00251

RNA/Proteins

Expression (GTEx)

0
1
2
3
4
5
6
7
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA164760860pegaspargaseChemicalClinicalAnnotationassociatedPD26590194
PA445187OsteonecrosisDiseaseClinicalAnnotationassociatedPD26590194
PA446155Precursor Cell Lymphoblastic Leukemia-LymphomaDiseaseClinicalAnnotationassociatedPD26590194
PA449165cyclophosphamideChemicalClinicalAnnotationassociatedPD26590194
PA449177cytarabineChemicalClinicalAnnotationassociatedPD26590194
PA449212daunorubicinChemicalClinicalAnnotationassociatedPD26590194
PA449247dexamethasoneChemicalClinicalAnnotationassociatedPD26590194
PA449412doxorubicinChemicalClinicalAnnotationassociatedPD26590194
PA450428methotrexateChemicalClinicalAnnotationassociatedPD26590194
PA451100prednisoneChemicalClinicalAnnotationassociatedPD26590194
PA451663thioguanineChemicalClinicalAnnotationassociatedPD26590194
PA451879vincristineChemicalClinicalAnnotationassociatedPD26590194

Citation

Dessen P

LINC00251 (long intergenic non-protein coding RNA 251)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/65328/linc00251