LINC00271 (long intergenic non-protein coding RNA 271)

2018-11-01 Affiliation

Identity

HGNC

LINC00271

LOCATION

6q23.3

LOCUSID

100131814

ALIAS

C6orf217,NCRNA00271

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 100131814
HGNC: 32526
Ensembl: ENSG00000231028

Variants:

dbSNP: 100131814
ClinVar: 100131814
TCGA: ENSG00000231028
COSMIC: LINC00271

RNA/Proteins

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
17668382	2007	Type 2 diabetes whole-genome association study in four populations: the DiaGen consortium.	68
20580033	2010	Replication of recently described type 2 diabetes gene variants in a South Indian population.	16
20452750	2010	Lymphoblast and brain expression of AHI1 and the novel primate-specific gene, C6orf217, in schizophrenia and bipolar disorder.	10
20452750	2010	Lymphoblast and brain expression of AHI1 and the novel primate-specific gene, C6orf217, in schizophrenia and bipolar disorder.	10
27833134	2016	Long intergenic non-coding RNA 271 is predictive of a poorer prognosis of papillary thyroid cancer.	0
31522749	2020	Adrenocortical tumors have a distinct, long, non-coding RNA expression profile and LINC00271 is downregulated in malignancy.	0

Citation

Dessen P

LINC00271 (long intergenic non-protein coding RNA 271)

Atlas Genet Cytogenet Oncol Haematol. 2018-11-01

Online version: http://atlasgeneticsoncology.org/gene/57669/linc00271