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LINC00377 (long intergenic non-protein coding RNA 377)

Identity

Alias (NCBI)TCONS_00021861
HGNC (Hugo) LINC00377
HGNC Alias symbTCONS_00021861
LocusID (NCBI) 103724386
Atlas_Id 65397
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 81018391 and ends at 81044442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00377   42703
Cards
Entrez_Gene (NCBI)LINC00377  103724386  long intergenic non-protein coding RNA 377
AliasesTCONS_00021861
GeneCards (Weizmann)LINC00377
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr13:81018391-81044442 [Contig_View]  LINC00377 [Vega]
TCGA cBioPortalLINC00377
AceView (NCBI)LINC00377
Genatlas (Paris)LINC00377
WikiGenes103724386
SOURCE (Princeton)LINC00377
Genetics Home Reference (NIH)LINC00377
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00377  -     chr13:81018391-81044442 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00377  -     13q31.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00377 - 13q31.1 [CytoView hg19]  LINC00377 - 13q31.1 [CytoView hg38]
genome Data Viewer NCBILINC00377 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI039503 BX119215
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00377
Gene ExpressionLINC00377 [ NCBI-GEO ]   LINC00377 [ EBI - ARRAY_EXPRESS ]   LINC00377 [ SEEK ]   LINC00377 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00377 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00377 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103724386
GTEX Portal (Tissue expression)LINC00377
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00377
DMDM Disease mutations103724386
Blocks (Seattle)LINC00377
Protein Interaction databases
BioGRIDLINC00377
STRING (EMBL)LINC00377
ZODIACLINC00377
Ontologies - Pathways
Huge Navigator LINC00377 [HugePedia]
snp3D : Map Gene to Disease103724386
BioCentury BCIQLINC00377
ClinGenLINC00377
Clinical trials, drugs, therapy
Protein Interactions : CTD103724386
Clinical trialLINC00377
Miscellaneous
canSAR (ICR)LINC00377 (select the gene name)
HarmonizomeLINC00377
DataMed IndexLINC00377
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00377
EVEXLINC00377
GoPubMedLINC00377
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:01:23 CEST 2020

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