Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00618 (long intergenic non-protein coding RNA 618)

Identity

Alias (NCBI)C14orf63
HGNC (Hugo) LINC00618
HGNC Previous nameC14orf63
HGNC Previous namechromosome 14 open reading frame 63
LocusID (NCBI) 145249
Atlas_Id 65536
Location 14q32.2  [Link to chromosome band 14q32]
Location_base_pair Starts at 96943579 and ends at 96945394 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00618   20110
Cards
Entrez_Gene (NCBI)LINC00618  145249  long intergenic non-protein coding RNA 618
AliasesC14orf63
GeneCards (Weizmann)LINC00618
Ensembl hg19 (Hinxton)ENSG00000225163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225163 [Gene_View]  ENSG00000225163 [Sequence]  chr14:96943579-96945394 [Contig_View]  LINC00618 [Vega]
ICGC DataPortalENSG00000225163
TCGA cBioPortalLINC00618
AceView (NCBI)LINC00618
Genatlas (Paris)LINC00618
WikiGenes145249
SOURCE (Princeton)LINC00618
Genetics Home Reference (NIH)LINC00618
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00618  -     chr14:96943579-96945394 +  14q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00618  -     14q32.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00618 - 14q32.2 [CytoView hg19]  LINC00618 - 14q32.2 [CytoView hg38]
ImmunoBaseENSG00000225163
genome Data Viewer NCBILINC00618 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA055628
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00618
Alternative Splicing GalleryENSG00000225163
Gene ExpressionLINC00618 [ NCBI-GEO ]   LINC00618 [ EBI - ARRAY_EXPRESS ]   LINC00618 [ SEEK ]   LINC00618 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00618 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00618 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145249
GTEX Portal (Tissue expression)LINC00618
Human Protein AtlasENSG00000225163-LINC00618 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00618
DMDM Disease mutations145249
Blocks (Seattle)LINC00618
Human Protein Atlas [tissue]ENSG00000225163-LINC00618 [tissue]
Protein Interaction databases
FunCoupENSG00000225163
BioGRIDLINC00618
STRING (EMBL)LINC00618
ZODIACLINC00618
Ontologies - Pathways
Huge Navigator LINC00618 [HugePedia]
snp3D : Map Gene to Disease145249
BioCentury BCIQLINC00618
ClinGenLINC00618
Clinical trials, drugs, therapy
Protein Interactions : CTD145249
Pharm GKB GenePA134956713
Clinical trialLINC00618
Miscellaneous
canSAR (ICR)LINC00618 (select the gene name)
HarmonizomeLINC00618
DataMed IndexLINC00618
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00618
EVEXLINC00618
GoPubMedLINC00618
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:01:51 CEST 2020

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