Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01060 (long intergenic non-protein coding RNA 1060)

Identity

Other alias-
HGNC (Hugo) LINC01060
LocusID (NCBI) 401164
Atlas_Id 58161
Location 4q35.2  [Link to chromosome band 4q35]
Location_base_pair Starts at 188455578 and ends at 188601908 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01060   49081
Cards
Entrez_Gene (NCBI)LINC01060  401164  long intergenic non-protein coding RNA 1060
Aliases
GeneCards (Weizmann)LINC01060
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:188455578-188601908 [Contig_View]  LINC01060 [Vega]
TCGA cBioPortalLINC01060
AceView (NCBI)LINC01060
Genatlas (Paris)LINC01060
WikiGenes401164
SOURCE (Princeton)LINC01060
Genetics Home Reference (NIH)LINC01060
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01060  -     chr4:188455578-188601908 +  4q35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01060  -     4q35.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01060 - 4q35.2 [CytoView hg19]  LINC01060 - 4q35.2 [CytoView hg38]
Mapping of homologs : NCBILINC01060 [Mapview hg19]  LINC01060 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI264253 AK095968 AY494056 DA579097
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NT_187545
Consensus coding sequences : CCDS (NCBI)LINC01060
Cluster EST : UnigeneHs.435756 [ NCBI ]
CGAP (NCI)Hs.435756
Gene ExpressionLINC01060 [ NCBI-GEO ]   LINC01060 [ EBI - ARRAY_EXPRESS ]   LINC01060 [ SEEK ]   LINC01060 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01060 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401164
GTEX Portal (Tissue expression)LINC01060
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01060
DMDM Disease mutations401164
Blocks (Seattle)LINC01060
Protein Interaction databases
BioGRIDLINC01060
STRING (EMBL)LINC01060
ZODIACLINC01060
Ontologies - Pathways
Huge Navigator LINC01060 [HugePedia]
snp3D : Map Gene to Disease401164
BioCentury BCIQLINC01060
ClinGenLINC01060
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401164
Clinical trialLINC01060
Miscellaneous
canSAR (ICR)LINC01060 (select the gene name)
DataMed IndexLINC01060
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01060
EVEXLINC01060
GoPubMedLINC01060
iHOPLINC01060
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:50:54 CET 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.