Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01186 (long intergenic non-protein coding RNA 1186)

Identity

Alias_symbol (synonym)ZNF674-1
Other alias
HGNC (Hugo) LINC01186
LocusID (NCBI) 101927574
Atlas_Id 56814
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 46325924 and ends at 46327674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC01186   49573
Cards
Entrez_Gene (NCBI)LINC01186  101927574  long intergenic non-protein coding RNA 1186
AliasesZNF674-1
GeneCards (Weizmann)LINC01186
Ensembl hg19 (Hinxton)ENSG00000236751 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236751 [Gene_View]  ENSG00000236751 [Sequence]  chrX:46325924-46327674 [Contig_View]  LINC01186 [Vega]
ICGC DataPortalENSG00000236751
TCGA cBioPortalLINC01186
AceView (NCBI)LINC01186
Genatlas (Paris)LINC01186
WikiGenes101927574
SOURCE (Princeton)LINC01186
Genetics Home Reference (NIH)LINC01186
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01186  -     chrX:46325924-46327674 -  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01186  -     Xp11.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01186 - Xp11.3 [CytoView hg19]  LINC01186 - Xp11.3 [CytoView hg38]
ImmunoBaseENSG00000236751
Mapping of homologs : NCBILINC01186 [Mapview hg19]  LINC01186 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL700385 BC015977 DW451179
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01186
Cluster EST : UnigeneHs.350952 [ NCBI ]
CGAP (NCI)Hs.350952
Alternative Splicing GalleryENSG00000236751
Gene ExpressionLINC01186 [ NCBI-GEO ]   LINC01186 [ EBI - ARRAY_EXPRESS ]   LINC01186 [ SEEK ]   LINC01186 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01186 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927574
GTEX Portal (Tissue expression)LINC01186
Human Protein AtlasENSG00000236751-LINC01186 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01186
DMDM Disease mutations101927574
Blocks (Seattle)LINC01186
Human Protein Atlas [tissue]ENSG00000236751-LINC01186 [tissue]
Protein Interaction databases
FunCoupENSG00000236751
BioGRIDLINC01186
STRING (EMBL)LINC01186
ZODIACLINC01186
Ontologies - Pathways
Huge Navigator LINC01186 [HugePedia]
snp3D : Map Gene to Disease101927574
BioCentury BCIQLINC01186
ClinGenLINC01186
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927574
Clinical trialLINC01186
Miscellaneous
canSAR (ICR)LINC01186 (select the gene name)
DataMed IndexLINC01186
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01186
EVEXLINC01186
GoPubMedLINC01186
iHOPLINC01186
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 26 18:14:50 CEST 2019
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