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LINC01259 (long intergenic non-protein coding RNA 1259)

Identity

Other aliasTCONS_00007515
HGNC (Hugo) LINC01259
LocusID (NCBI) 106144599
Atlas_Id 80499
Location 4p14  [Link to chromosome band 4p14]
Location_base_pair Starts at 38509767 and ends at 38518056 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01259   49899
Cards
Entrez_Gene (NCBI)LINC01259  106144599  long intergenic non-protein coding RNA 1259
AliasesTCONS_00007515
GeneCards (Weizmann)LINC01259
Ensembl hg19 (Hinxton)ENSG00000249667 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249667 [Gene_View]  ENSG00000249667 [Sequence]  chr4:38509767-38518056 [Contig_View]  LINC01259 [Vega]
ICGC DataPortalENSG00000249667
TCGA cBioPortalLINC01259
AceView (NCBI)LINC01259
Genatlas (Paris)LINC01259
WikiGenes106144599
SOURCE (Princeton)LINC01259
Genetics Home Reference (NIH)LINC01259
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01259  -     chr4:38509767-38518056 +  4p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01259  -     4p14   [Description]    (hg19-Feb_2009)
GoldenPathLINC01259 - 4p14 [CytoView hg19]  LINC01259 - 4p14 [CytoView hg38]
ImmunoBaseENSG00000249667
Mapping of homologs : NCBILINC01259 [Mapview hg19]  LINC01259 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR984336
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01259
Cluster EST : UnigeneHs.582017 [ NCBI ]
CGAP (NCI)Hs.582017
Alternative Splicing GalleryENSG00000249667
Gene ExpressionLINC01259 [ NCBI-GEO ]   LINC01259 [ EBI - ARRAY_EXPRESS ]   LINC01259 [ SEEK ]   LINC01259 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01259 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106144599
GTEX Portal (Tissue expression)LINC01259
Human Protein AtlasENSG00000249667-LINC01259 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01259
DMDM Disease mutations106144599
Blocks (Seattle)LINC01259
Human Protein Atlas [tissue]ENSG00000249667-LINC01259 [tissue]
Protein Interaction databases
FunCoupENSG00000249667
BioGRIDLINC01259
STRING (EMBL)LINC01259
ZODIACLINC01259
Ontologies - Pathways
Huge Navigator LINC01259 [HugePedia]
snp3D : Map Gene to Disease106144599
BioCentury BCIQLINC01259
ClinGenLINC01259
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106144599
Clinical trialLINC01259
Miscellaneous
canSAR (ICR)LINC01259 (select the gene name)
DataMed IndexLINC01259
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01259
EVEXLINC01259
GoPubMedLINC01259
iHOPLINC01259
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:35:57 CEST 2019

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