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LINC01288 (long intergenic non-protein coding RNA 1288)

Identity

Alias_symbol (synonym)TCONS_00014671
Other alias
HGNC (Hugo) LINC01288
LocusID (NCBI) 103689844
Atlas_Id 65915
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 34783921 and ends at 34864798 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC01288   50353
Cards
Entrez_Gene (NCBI)LINC01288  103689844  long intergenic non-protein coding RNA 1288
AliasesTCONS_00014671
GeneCards (Weizmann)LINC01288
Ensembl hg19 (Hinxton)ENSG00000254344 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254344 [Gene_View]  ENSG00000254344 [Sequence]  chr8:34783921-34864798 [Contig_View]  LINC01288 [Vega]
ICGC DataPortalENSG00000254344
TCGA cBioPortalLINC01288
AceView (NCBI)LINC01288
Genatlas (Paris)LINC01288
WikiGenes103689844
SOURCE (Princeton)LINC01288
Genetics Home Reference (NIH)LINC01288
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01288  -     chr8:34783921-34864798 +  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01288  -     8p12   [Description]    (hg19-Feb_2009)
GoldenPathLINC01288 - 8p12 [CytoView hg19]  LINC01288 - 8p12 [CytoView hg38]
ImmunoBaseENSG00000254344
Mapping of homologs : NCBILINC01288 [Mapview hg19]  LINC01288 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB066514
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01288
Cluster EST : UnigeneHs.590682 [ NCBI ]
CGAP (NCI)Hs.590682
Alternative Splicing GalleryENSG00000254344
Gene ExpressionLINC01288 [ NCBI-GEO ]   LINC01288 [ EBI - ARRAY_EXPRESS ]   LINC01288 [ SEEK ]   LINC01288 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01288 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103689844
GTEX Portal (Tissue expression)LINC01288
Human Protein AtlasENSG00000254344-LINC01288 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01288
DMDM Disease mutations103689844
Blocks (Seattle)LINC01288
Human Protein Atlas [tissue]ENSG00000254344-LINC01288 [tissue]
Protein Interaction databases
FunCoupENSG00000254344
BioGRIDLINC01288
STRING (EMBL)LINC01288
ZODIACLINC01288
Ontologies - Pathways
Huge Navigator LINC01288 [HugePedia]
snp3D : Map Gene to Disease103689844
BioCentury BCIQLINC01288
ClinGenLINC01288
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103689844
Clinical trialLINC01288
Miscellaneous
canSAR (ICR)LINC01288 (select the gene name)
DataMed IndexLINC01288
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01288
EVEXLINC01288
GoPubMedLINC01288
iHOPLINC01288
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:36:02 CEST 2019
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