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LINC01290 (long intergenic non-protein coding RNA 1290)

Identity

Other alias-
HGNC (Hugo) LINC01290
LocusID (NCBI) 106144584
Atlas_Id 80446
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 10514843 and ends at 10528198 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01290   50356
Cards
Entrez_Gene (NCBI)LINC01290  106144584  long intergenic non-protein coding RNA 1290
Aliases
GeneCards (Weizmann)LINC01290
Ensembl hg19 (Hinxton)ENSG00000260468 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260468 [Gene_View]  ENSG00000260468 [Sequence]  chr16:10514843-10528198 [Contig_View]  LINC01290 [Vega]
ICGC DataPortalENSG00000260468
TCGA cBioPortalLINC01290
AceView (NCBI)LINC01290
Genatlas (Paris)LINC01290
WikiGenes106144584
SOURCE (Princeton)LINC01290
Genetics Home Reference (NIH)LINC01290
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01290  -     chr16:10514843-10528198 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01290  -     16p13.13   [Description]    (hg19-Feb_2009)
GoldenPathLINC01290 - 16p13.13 [CytoView hg19]  LINC01290 - 16p13.13 [CytoView hg38]
ImmunoBaseENSG00000260468
Mapping of homologs : NCBILINC01290 [Mapview hg19]  LINC01290 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF853722 BI010826
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01290
Cluster EST : UnigeneHs.531561 [ NCBI ]
CGAP (NCI)Hs.531561
Alternative Splicing GalleryENSG00000260468
Gene ExpressionLINC01290 [ NCBI-GEO ]   LINC01290 [ EBI - ARRAY_EXPRESS ]   LINC01290 [ SEEK ]   LINC01290 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01290 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106144584
GTEX Portal (Tissue expression)LINC01290
Human Protein AtlasENSG00000260468-LINC01290 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01290
DMDM Disease mutations106144584
Blocks (Seattle)LINC01290
Human Protein Atlas [tissue]ENSG00000260468-LINC01290 [tissue]
Protein Interaction databases
FunCoupENSG00000260468
BioGRIDLINC01290
STRING (EMBL)LINC01290
ZODIACLINC01290
Ontologies - Pathways
Huge Navigator LINC01290 [HugePedia]
snp3D : Map Gene to Disease106144584
BioCentury BCIQLINC01290
ClinGenLINC01290
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106144584
Clinical trialLINC01290
Miscellaneous
canSAR (ICR)LINC01290 (select the gene name)
DataMed IndexLINC01290
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01290
EVEXLINC01290
GoPubMedLINC01290
iHOPLINC01290
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:36:02 CEST 2019

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