Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01424 (long intergenic non-protein coding RNA 1424)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01424
LocusID (NCBI) 101928689
Atlas_Id 65984
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44802241 and ends at 44804716 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01424   40558
Cards
Entrez_Gene (NCBI)LINC01424    long intergenic non-protein coding RNA 1424
Aliases
GeneCards (Weizmann)LINC01424
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr21:44802241-44804716 [Contig_View]  LINC01424 [Vega]
TCGA cBioPortalLINC01424
AceView (NCBI)LINC01424
Genatlas (Paris)LINC01424
SOURCE (Princeton)LINC01424
Genetics Home Reference (NIH)LINC01424
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01424  -     chr21:44802241-44804716 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01424  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01424 - 21q22.3 [CytoView hg19]  LINC01424 - 21q22.3 [CytoView hg38]
genome Data Viewer NCBILINC01424 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX100043 HY006996 N50783
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01424
Gene ExpressionLINC01424 [ NCBI-GEO ]   LINC01424 [ EBI - ARRAY_EXPRESS ]   LINC01424 [ SEEK ]   LINC01424 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01424 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01424 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928689
GTEX Portal (Tissue expression)LINC01424
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01424
Blocks (Seattle)LINC01424
Protein Interaction databases
BioGRIDLINC01424
STRING (EMBL)LINC01424
ZODIACLINC01424
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01424
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 28 17:03:58 CEST 2021

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