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LINC01697 (long intergenic non-protein coding RNA 1697)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01697
LocusID (NCBI) 284825
Atlas_Id 80237
Location 21q21.3  [Link to chromosome band 21q21]
Location_base_pair Starts at 28090403 and ends at 28103264 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01697   52485
Cards
Entrez_Gene (NCBI)LINC01697    long intergenic non-protein coding RNA 1697
Aliases
GeneCards (Weizmann)LINC01697
Ensembl hg19 (Hinxton)ENSG00000232079 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232079 [Gene_View]  ENSG00000232079 [Sequence]  chr21:28090403-28103264 [Contig_View]  LINC01697 [Vega]
ICGC DataPortalENSG00000232079
TCGA cBioPortalLINC01697
AceView (NCBI)LINC01697
Genatlas (Paris)LINC01697
SOURCE (Princeton)LINC01697
Genetics Home Reference (NIH)LINC01697
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01697  -     chr21:28090403-28103264 +  21q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01697  -     21q21.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01697 - 21q21.3 [CytoView hg19]  LINC01697 - 21q21.3 [CytoView hg38]
ImmunoBaseENSG00000232079
genome Data Viewer NCBILINC01697 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093119 BC039446 CD515480
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01697
Alternative Splicing GalleryENSG00000232079
Gene ExpressionLINC01697 [ NCBI-GEO ]   LINC01697 [ EBI - ARRAY_EXPRESS ]   LINC01697 [ SEEK ]   LINC01697 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01697 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01697 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284825
GTEX Portal (Tissue expression)LINC01697
Human Protein AtlasENSG00000232079-LINC01697 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01697
Blocks (Seattle)LINC01697
Human Protein Atlas [tissue]ENSG00000232079-LINC01697 [tissue]
Protein Interaction databases
BioGRIDLINC01697
STRING (EMBL)LINC01697
ZODIACLINC01697
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01697
EVEXLINC01697
GoPubMedLINC01697
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:03:04 CET 2020

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