Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01697 (long intergenic non-protein coding RNA 1697)


Alias (NCBI)-
HGNC (Hugo) LINC01697
LocusID (NCBI) 284825
Atlas_Id 80237
Location 21q21.3  [Link to chromosome band 21q21]
Location_base_pair Starts at 28090403 and ends at 28103264 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01697   52485
Entrez_Gene (NCBI)LINC01697    long intergenic non-protein coding RNA 1697
GeneCards (Weizmann)LINC01697
Ensembl hg19 (Hinxton)ENSG00000232079 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232079 [Gene_View]  ENSG00000232079 [Sequence]  chr21:28090403-28103264 [Contig_View]  LINC01697 [Vega]
ICGC DataPortalENSG00000232079
TCGA cBioPortalLINC01697
AceView (NCBI)LINC01697
Genatlas (Paris)LINC01697
SOURCE (Princeton)LINC01697
Genetics Home Reference (NIH)LINC01697
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01697  -     chr21:28090403-28103264 +  21q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01697  -     21q21.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01697 - 21q21.3 [CytoView hg19]  LINC01697 - 21q21.3 [CytoView hg38]
genome Data Viewer NCBILINC01697 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093119 BC039446 CD515480
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01697
Alternative Splicing GalleryENSG00000232079
Gene ExpressionLINC01697 [ NCBI-GEO ]   LINC01697 [ EBI - ARRAY_EXPRESS ]   LINC01697 [ SEEK ]   LINC01697 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01697 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01697 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284825
GTEX Portal (Tissue expression)LINC01697
Human Protein AtlasENSG00000232079-LINC01697 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01697
Blocks (Seattle)LINC01697
Human Protein Atlas [tissue]ENSG00000232079-LINC01697 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:03:04 CET 2020

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