Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01758 (long intergenic non-protein coding RNA 1758)

Identity

Other alias-
HGNC (Hugo) LINC01758
LocusID (NCBI) 105378788
Atlas_Id 79240
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 69433255 and ends at 69435409 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)LINC01758   52547
Cards
Entrez_Gene (NCBI)LINC01758  105378788  long intergenic non-protein coding RNA 1758
Aliases
GeneCards (Weizmann)LINC01758
Ensembl hg19 (Hinxton)ENSG00000229639 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229639 [Gene_View]  ENSG00000229639 [Sequence]  chr1:69433255-69435409 [Contig_View]  LINC01758 [Vega]
ICGC DataPortalENSG00000229639
TCGA cBioPortalLINC01758
AceView (NCBI)LINC01758
Genatlas (Paris)LINC01758
WikiGenes105378788
SOURCE (Princeton)LINC01758
Genetics Home Reference (NIH)LINC01758
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01758  -     chr1:69433255-69435409 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01758  -     1p31.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01758 - 1p31.1 [CytoView hg19]  LINC01758 - 1p31.1 [CytoView hg38]
ImmunoBaseENSG00000229639
Mapping of homologs : NCBILINC01758 [Mapview hg19]  LINC01758 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI373241
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01758
Alternative Splicing GalleryENSG00000229639
Gene ExpressionLINC01758 [ NCBI-GEO ]   LINC01758 [ EBI - ARRAY_EXPRESS ]   LINC01758 [ SEEK ]   LINC01758 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01758 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378788
GTEX Portal (Tissue expression)LINC01758
Human Protein AtlasENSG00000229639-LINC01758 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01758
DMDM Disease mutations105378788
Blocks (Seattle)LINC01758
Human Protein Atlas [tissue]ENSG00000229639-LINC01758 [tissue]
Protein Interaction databases
FunCoupENSG00000229639
BioGRIDLINC01758
STRING (EMBL)LINC01758
ZODIACLINC01758
Ontologies - Pathways
Huge Navigator LINC01758 [HugePedia]
snp3D : Map Gene to Disease105378788
BioCentury BCIQLINC01758
ClinGenLINC01758
Clinical trials, drugs, therapy
Protein Interactions : CTD105378788
Clinical trialLINC01758
Miscellaneous
canSAR (ICR)LINC01758 (select the gene name)
HarmonizomeLINC01758
DataMed IndexLINC01758
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01758
EVEXLINC01758
GoPubMedLINC01758
iHOPLINC01758
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Jun 30 19:45:54 CEST 2020
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.