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LINC01807 (long intergenic non-protein coding RNA 1807)

Identity

Other alias-
HGNC (Hugo) LINC01807
LocusID (NCBI) 101928765
Atlas_Id 80431
Location 2q36.3  [Link to chromosome band 2q36]
Location_base_pair Starts at 228483263 and ends at 228611395 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01807   52610
Cards
Entrez_Gene (NCBI)LINC01807  101928765  long intergenic non-protein coding RNA 1807
Aliases
GeneCards (Weizmann)LINC01807
Ensembl hg19 (Hinxton)ENSG00000232023 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232023 [Gene_View]  ENSG00000232023 [Sequence]  chr2:228483263-228611395 [Contig_View]  LINC01807 [Vega]
ICGC DataPortalENSG00000232023
TCGA cBioPortalLINC01807
AceView (NCBI)LINC01807
Genatlas (Paris)LINC01807
WikiGenes101928765
SOURCE (Princeton)LINC01807
Genetics Home Reference (NIH)LINC01807
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01807  -     chr2:228483263-228611395 -  2q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01807  -     2q36.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01807 - 2q36.3 [CytoView hg19]  LINC01807 - 2q36.3 [CytoView hg38]
ImmunoBaseENSG00000232023
Mapping of homologs : NCBILINC01807 [Mapview hg19]  LINC01807 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV702526
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01807
Cluster EST : UnigeneHs.334040 [ NCBI ]
CGAP (NCI)Hs.334040
Alternative Splicing GalleryENSG00000232023
Gene ExpressionLINC01807 [ NCBI-GEO ]   LINC01807 [ EBI - ARRAY_EXPRESS ]   LINC01807 [ SEEK ]   LINC01807 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01807 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928765
GTEX Portal (Tissue expression)LINC01807
Human Protein AtlasENSG00000232023-LINC01807 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01807
DMDM Disease mutations101928765
Blocks (Seattle)LINC01807
Human Protein Atlas [tissue]ENSG00000232023-LINC01807 [tissue]
Protein Interaction databases
FunCoupENSG00000232023
BioGRIDLINC01807
STRING (EMBL)LINC01807
ZODIACLINC01807
Ontologies - Pathways
Huge Navigator LINC01807 [HugePedia]
snp3D : Map Gene to Disease101928765
BioCentury BCIQLINC01807
ClinGenLINC01807
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928765
Clinical trialLINC01807
Miscellaneous
canSAR (ICR)LINC01807 (select the gene name)
DataMed IndexLINC01807
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01807
EVEXLINC01807
GoPubMedLINC01807
iHOPLINC01807
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:37:17 CEST 2019

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