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LINC01846 (long intergenic non-protein coding RNA 1846)

Identity

Other alias-
HGNC (Hugo) LINC01846
LocusID (NCBI) 105379098
Atlas_Id 80086
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 98085866 and ends at 98161239 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01846   52661
Cards
Entrez_Gene (NCBI)LINC01846  105379098  long intergenic non-protein coding RNA 1846
Aliases
GeneCards (Weizmann)LINC01846
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:98085866-98161239 [Contig_View]  LINC01846 [Vega]
TCGA cBioPortalLINC01846
AceView (NCBI)LINC01846
Genatlas (Paris)LINC01846
WikiGenes105379098
SOURCE (Princeton)LINC01846
Genetics Home Reference (NIH)LINC01846
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01846  -     chr5:98085866-98161239 -  5q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01846  -     5q15   [Description]    (hg19-Feb_2009)
GoldenPathLINC01846 - 5q15 [CytoView hg19]  LINC01846 - 5q15 [CytoView hg38]
Mapping of homologs : NCBILINC01846 [Mapview hg19]  LINC01846 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA972207 BX094454
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01846
Cluster EST : UnigeneHs.582249 [ NCBI ]
CGAP (NCI)Hs.582249
Gene ExpressionLINC01846 [ NCBI-GEO ]   LINC01846 [ EBI - ARRAY_EXPRESS ]   LINC01846 [ SEEK ]   LINC01846 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01846 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105379098
GTEX Portal (Tissue expression)LINC01846
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01846
DMDM Disease mutations105379098
Blocks (Seattle)LINC01846
Protein Interaction databases
BioGRIDLINC01846
STRING (EMBL)LINC01846
ZODIACLINC01846
Ontologies - Pathways
Huge Navigator LINC01846 [HugePedia]
snp3D : Map Gene to Disease105379098
BioCentury BCIQLINC01846
ClinGenLINC01846
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105379098
Clinical trialLINC01846
Miscellaneous
canSAR (ICR)LINC01846 (select the gene name)
DataMed IndexLINC01846
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01846
EVEXLINC01846
GoPubMedLINC01846
iHOPLINC01846
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:37:23 CEST 2019

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