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LINC01861 (long intergenic non-protein coding RNA 1861)

Identity

Other alias-
HGNC (Hugo) LINC01861
LocusID (NCBI) 105378238
Atlas_Id 79354
Location 5q33.2  [Link to chromosome band 5q33]
Location_base_pair Starts at 153887428 and ends at 153898987 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01861   52680
Cards
Entrez_Gene (NCBI)LINC01861  105378238  long intergenic non-protein coding RNA 1861
Aliases
GeneCards (Weizmann)LINC01861
Ensembl hg19 (Hinxton)ENSG00000251183 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251183 [Gene_View]  ENSG00000251183 [Sequence]  chr5:153887428-153898987 [Contig_View]  LINC01861 [Vega]
ICGC DataPortalENSG00000251183
TCGA cBioPortalLINC01861
AceView (NCBI)LINC01861
Genatlas (Paris)LINC01861
WikiGenes105378238
SOURCE (Princeton)LINC01861
Genetics Home Reference (NIH)LINC01861
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01861  -     chr5:153887428-153898987 -  5q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01861  -     5q33.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01861 - 5q33.2 [CytoView hg19]  LINC01861 - 5q33.2 [CytoView hg38]
ImmunoBaseENSG00000251183
Mapping of homologs : NCBILINC01861 [Mapview hg19]  LINC01861 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB055790
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01861
Cluster EST : UnigeneHs.590229 [ NCBI ]
CGAP (NCI)Hs.590229
Alternative Splicing GalleryENSG00000251183
Gene ExpressionLINC01861 [ NCBI-GEO ]   LINC01861 [ EBI - ARRAY_EXPRESS ]   LINC01861 [ SEEK ]   LINC01861 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01861 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378238
GTEX Portal (Tissue expression)LINC01861
Human Protein AtlasENSG00000251183-LINC01861 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01861
DMDM Disease mutations105378238
Blocks (Seattle)LINC01861
Human Protein Atlas [tissue]ENSG00000251183-LINC01861 [tissue]
Protein Interaction databases
FunCoupENSG00000251183
BioGRIDLINC01861
STRING (EMBL)LINC01861
ZODIACLINC01861
Ontologies - Pathways
Huge Navigator LINC01861 [HugePedia]
snp3D : Map Gene to Disease105378238
BioCentury BCIQLINC01861
ClinGenLINC01861
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378238
Clinical trialLINC01861
Miscellaneous
canSAR (ICR)LINC01861 (select the gene name)
DataMed IndexLINC01861
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01861
EVEXLINC01861
GoPubMedLINC01861
iHOPLINC01861
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:37:25 CEST 2019

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