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LINC02020 (long intergenic non-protein coding RNA 2020)

Identity

Other alias-
HGNC (Hugo) LINC02020
LocusID (NCBI) 107986164
Atlas_Id 80404
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186440345 and ends at 186445242 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02020   52855
Cards
Entrez_Gene (NCBI)LINC02020  107986164  long intergenic non-protein coding RNA 2020
Aliases
GeneCards (Weizmann)LINC02020
Ensembl hg19 (Hinxton)ENSG00000234548 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234548 [Gene_View]  ENSG00000234548 [Sequence]  chr3:186440345-186445242 [Contig_View]  LINC02020 [Vega]
ICGC DataPortalENSG00000234548
TCGA cBioPortalLINC02020
AceView (NCBI)LINC02020
Genatlas (Paris)LINC02020
WikiGenes107986164
SOURCE (Princeton)LINC02020
Genetics Home Reference (NIH)LINC02020
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02020  -     chr3:186440345-186445242 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02020  -     3q27.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02020 - 3q27.3 [CytoView hg19]  LINC02020 - 3q27.3 [CytoView hg38]
ImmunoBaseENSG00000234548
Mapping of homologs : NCBILINC02020 [Mapview hg19]  LINC02020 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB047577 DB047828 DB054619 DB097510
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02020
Cluster EST : UnigeneHs.131227 [ NCBI ]
CGAP (NCI)Hs.131227
Alternative Splicing GalleryENSG00000234548
Gene ExpressionLINC02020 [ NCBI-GEO ]   LINC02020 [ EBI - ARRAY_EXPRESS ]   LINC02020 [ SEEK ]   LINC02020 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02020 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107986164
GTEX Portal (Tissue expression)LINC02020
Human Protein AtlasENSG00000234548-LINC02020 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02020
DMDM Disease mutations107986164
Blocks (Seattle)LINC02020
Human Protein Atlas [tissue]ENSG00000234548-LINC02020 [tissue]
Protein Interaction databases
FunCoupENSG00000234548
BioGRIDLINC02020
STRING (EMBL)LINC02020
ZODIACLINC02020
Ontologies - Pathways
Huge Navigator LINC02020 [HugePedia]
snp3D : Map Gene to Disease107986164
BioCentury BCIQLINC02020
ClinGenLINC02020
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107986164
Clinical trialLINC02020
Miscellaneous
canSAR (ICR)LINC02020 (select the gene name)
DataMed IndexLINC02020
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02020
EVEXLINC02020
GoPubMedLINC02020
iHOPLINC02020
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:37:48 CEST 2019

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