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LINC02135 (long intergenic non-protein coding RNA 2135)

Identity

Other alias-
HGNC (Hugo) LINC02135
LocusID (NCBI) 146513
Atlas_Id 79428
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 86286431 and ends at 86293389 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC02135   27094
Cards
Entrez_Gene (NCBI)LINC02135  146513  long intergenic non-protein coding RNA 2135
Aliases
GeneCards (Weizmann)LINC02135
Ensembl hg19 (Hinxton)ENSG00000268532 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268532 [Gene_View]  ENSG00000268532 [Sequence]  chr16:86286431-86293389 [Contig_View]  LINC02135 [Vega]
ICGC DataPortalENSG00000268532
TCGA cBioPortalLINC02135
AceView (NCBI)LINC02135
Genatlas (Paris)LINC02135
WikiGenes146513
SOURCE (Princeton)LINC02135
Genetics Home Reference (NIH)LINC02135
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02135  -     chr16:86286431-86293389 +  16q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02135  -     16q24.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02135 - 16q24.1 [CytoView hg19]  LINC02135 - 16q24.1 [CytoView hg38]
ImmunoBaseENSG00000268532
Mapping of homologs : NCBILINC02135 [Mapview hg19]  LINC02135 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043214
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02135
Cluster EST : UnigeneHs.434338 [ NCBI ]
CGAP (NCI)Hs.434338
Alternative Splicing GalleryENSG00000268532
Gene ExpressionLINC02135 [ NCBI-GEO ]   LINC02135 [ EBI - ARRAY_EXPRESS ]   LINC02135 [ SEEK ]   LINC02135 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02135 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)146513
GTEX Portal (Tissue expression)LINC02135
Human Protein AtlasENSG00000268532-LINC02135 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02135
DMDM Disease mutations146513
Blocks (Seattle)LINC02135
Human Protein Atlas [tissue]ENSG00000268532-LINC02135 [tissue]
Protein Interaction databases
FunCoupENSG00000268532
BioGRIDLINC02135
STRING (EMBL)LINC02135
ZODIACLINC02135
Ontologies - Pathways
Huge Navigator LINC02135 [HugePedia]
snp3D : Map Gene to Disease146513
BioCentury BCIQLINC02135
ClinGenLINC02135
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146513
Clinical trialLINC02135
Miscellaneous
canSAR (ICR)LINC02135 (select the gene name)
DataMed IndexLINC02135
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02135
EVEXLINC02135
GoPubMedLINC02135
iHOPLINC02135
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:38:05 CEST 2019
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