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LINC02146 (long intergenic non-protein coding RNA 2146)

Identity

Other alias-
HGNC (Hugo) LINC02146
LocusID (NCBI) 105374677
Atlas_Id 78962
Location 5p14.3  [Link to chromosome band 5p14]
Location_base_pair Starts at 20612625 and ends at 20615535 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02146   53006
Cards
Entrez_Gene (NCBI)LINC02146  105374677  long intergenic non-protein coding RNA 2146
Aliases
GeneCards (Weizmann)LINC02146
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:20612625-20615535 [Contig_View]  LINC02146 [Vega]
TCGA cBioPortalLINC02146
AceView (NCBI)LINC02146
Genatlas (Paris)LINC02146
WikiGenes105374677
SOURCE (Princeton)LINC02146
Genetics Home Reference (NIH)LINC02146
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02146  -     chr5:20612625-20615535 -  5p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02146  -     5p14.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02146 - 5p14.3 [CytoView hg19]  LINC02146 - 5p14.3 [CytoView hg38]
Mapping of homologs : NCBILINC02146 [Mapview hg19]  LINC02146 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW087746
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02146
Gene ExpressionLINC02146 [ NCBI-GEO ]   LINC02146 [ EBI - ARRAY_EXPRESS ]   LINC02146 [ SEEK ]   LINC02146 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02146 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374677
GTEX Portal (Tissue expression)LINC02146
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02146
DMDM Disease mutations105374677
Blocks (Seattle)LINC02146
Protein Interaction databases
BioGRIDLINC02146
STRING (EMBL)LINC02146
ZODIACLINC02146
Ontologies - Pathways
Huge Navigator LINC02146 [HugePedia]
snp3D : Map Gene to Disease105374677
BioCentury BCIQLINC02146
ClinGenLINC02146
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374677
Clinical trialLINC02146
Miscellaneous
canSAR (ICR)LINC02146 (select the gene name)
DataMed IndexLINC02146
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02146
EVEXLINC02146
GoPubMedLINC02146
iHOPLINC02146
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:38:07 CEST 2019

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