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LINC02149 (long intergenic non-protein coding RNA 2149)

Identity

Other alias-
HGNC (Hugo) LINC02149
LocusID (NCBI) 101929454
Atlas_Id 80229
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 15191646 and ends at 15266560 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02149   53010
Cards
Entrez_Gene (NCBI)LINC02149  101929454  long intergenic non-protein coding RNA 2149
Aliases
GeneCards (Weizmann)LINC02149
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:15191646-15266560 [Contig_View]  LINC02149 [Vega]
TCGA cBioPortalLINC02149
AceView (NCBI)LINC02149
Genatlas (Paris)LINC02149
WikiGenes101929454
SOURCE (Princeton)LINC02149
Genetics Home Reference (NIH)LINC02149
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02149  -     chr5:15191646-15266560 -  5p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02149  -     5p15.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02149 - 5p15.1 [CytoView hg19]  LINC02149 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02149 [Mapview hg19]  LINC02149 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC002741
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02149
Cluster EST : UnigeneHs.453273 [ NCBI ]
CGAP (NCI)Hs.453273
Gene ExpressionLINC02149 [ NCBI-GEO ]   LINC02149 [ EBI - ARRAY_EXPRESS ]   LINC02149 [ SEEK ]   LINC02149 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02149 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929454
GTEX Portal (Tissue expression)LINC02149
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02149
DMDM Disease mutations101929454
Blocks (Seattle)LINC02149
Protein Interaction databases
BioGRIDLINC02149
STRING (EMBL)LINC02149
ZODIACLINC02149
Ontologies - Pathways
Huge Navigator LINC02149 [HugePedia]
snp3D : Map Gene to Disease101929454
BioCentury BCIQLINC02149
ClinGenLINC02149
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929454
Clinical trialLINC02149
Miscellaneous
canSAR (ICR)LINC02149 (select the gene name)
DataMed IndexLINC02149
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02149
EVEXLINC02149
GoPubMedLINC02149
iHOPLINC02149
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:38:07 CEST 2019

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