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LINC02160 (long intergenic non-protein coding RNA 2160)

Identity

Other alias-
HGNC (Hugo) LINC02160
LocusID (NCBI) 105374716
Atlas_Id 79313
Location 5p13.3  [Link to chromosome band 5p13]
Location_base_pair Starts at 33229735 and ends at 33255553 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02160   53021
Cards
Entrez_Gene (NCBI)LINC02160  105374716  long intergenic non-protein coding RNA 2160
Aliases
GeneCards (Weizmann)LINC02160
Ensembl hg19 (Hinxton)ENSG00000251443 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251443 [Gene_View]  ENSG00000251443 [Sequence]  chr5:33229735-33255553 [Contig_View]  LINC02160 [Vega]
ICGC DataPortalENSG00000251443
TCGA cBioPortalLINC02160
AceView (NCBI)LINC02160
Genatlas (Paris)LINC02160
WikiGenes105374716
SOURCE (Princeton)LINC02160
Genetics Home Reference (NIH)LINC02160
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02160  -     chr5:33229735-33255553 +  5p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02160  -     5p13.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02160 - 5p13.3 [CytoView hg19]  LINC02160 - 5p13.3 [CytoView hg38]
ImmunoBaseENSG00000251443
Mapping of homologs : NCBILINC02160 [Mapview hg19]  LINC02160 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX485935
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02160
Cluster EST : UnigeneHs.582475 [ NCBI ]
CGAP (NCI)Hs.582475
Alternative Splicing GalleryENSG00000251443
Gene ExpressionLINC02160 [ NCBI-GEO ]   LINC02160 [ EBI - ARRAY_EXPRESS ]   LINC02160 [ SEEK ]   LINC02160 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02160 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374716
GTEX Portal (Tissue expression)LINC02160
Human Protein AtlasENSG00000251443-LINC02160 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02160
DMDM Disease mutations105374716
Blocks (Seattle)LINC02160
Human Protein Atlas [tissue]ENSG00000251443-LINC02160 [tissue]
Protein Interaction databases
FunCoupENSG00000251443
BioGRIDLINC02160
STRING (EMBL)LINC02160
ZODIACLINC02160
Ontologies - Pathways
Huge Navigator LINC02160 [HugePedia]
snp3D : Map Gene to Disease105374716
BioCentury BCIQLINC02160
ClinGenLINC02160
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374716
Clinical trialLINC02160
Miscellaneous
canSAR (ICR)LINC02160 (select the gene name)
DataMed IndexLINC02160
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02160
EVEXLINC02160
GoPubMedLINC02160
iHOPLINC02160
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:38:09 CEST 2019

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