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LINC02223 (long intergenic non-protein coding RNA 2223)

Identity

Other alias-
HGNC (Hugo) LINC02223
LocusID (NCBI) 646241
Atlas_Id 79241
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 17807274 and ends at 17930489 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02223   53092
Cards
Entrez_Gene (NCBI)LINC02223  646241  long intergenic non-protein coding RNA 2223
Aliases
GeneCards (Weizmann)LINC02223
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:17807274-17930489 [Contig_View]  LINC02223 [Vega]
TCGA cBioPortalLINC02223
AceView (NCBI)LINC02223
Genatlas (Paris)LINC02223
WikiGenes646241
SOURCE (Princeton)LINC02223
Genetics Home Reference (NIH)LINC02223
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02223  -     chr5:17807274-17930489 +  5p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02223  -     5p15.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02223 - 5p15.1 [CytoView hg19]  LINC02223 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02223 [Mapview hg19]  LINC02223 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028204 BC031324
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02223
Cluster EST : UnigeneHs.407197 [ NCBI ]
CGAP (NCI)Hs.407197
Gene ExpressionLINC02223 [ NCBI-GEO ]   LINC02223 [ EBI - ARRAY_EXPRESS ]   LINC02223 [ SEEK ]   LINC02223 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02223 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646241
GTEX Portal (Tissue expression)LINC02223
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02223
DMDM Disease mutations646241
Blocks (Seattle)LINC02223
Protein Interaction databases
BioGRIDLINC02223
STRING (EMBL)LINC02223
ZODIACLINC02223
Ontologies - Pathways
Huge Navigator LINC02223 [HugePedia]
snp3D : Map Gene to Disease646241
BioCentury BCIQLINC02223
ClinGenLINC02223
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646241
Clinical trialLINC02223
Miscellaneous
canSAR (ICR)LINC02223 (select the gene name)
DataMed IndexLINC02223
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02223
EVEXLINC02223
GoPubMedLINC02223
iHOPLINC02223
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:38:18 CEST 2019

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