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LINC02258 (long intergenic non-protein coding RNA 2258)

Identity

Other alias-
HGNC (Hugo) LINC02258
LocusID (NCBI) 110806294
Atlas_Id 80552
Location 12q21.32  [Link to chromosome band 12q21]
Location_base_pair Starts at 87768812 and ends at 87805749 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02258   53165
Cards
Entrez_Gene (NCBI)LINC02258  110806294  long intergenic non-protein coding RNA 2258
Aliases
GeneCards (Weizmann)LINC02258
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr12:87768812-87805749 [Contig_View]  LINC02258 [Vega]
TCGA cBioPortalLINC02258
AceView (NCBI)LINC02258
Genatlas (Paris)LINC02258
WikiGenes110806294
SOURCE (Princeton)LINC02258
Genetics Home Reference (NIH)LINC02258
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02258  -     chr12:87768812-87805749 +  12q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02258  -     12q21.32   [Description]    (hg19-Feb_2009)
GoldenPathLINC02258 - 12q21.32 [CytoView hg19]  LINC02258 - 12q21.32 [CytoView hg38]
Mapping of homologs : NCBILINC02258 [Mapview hg19]  LINC02258 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB450698
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02258
Cluster EST : UnigeneHs.615803 [ NCBI ]
CGAP (NCI)Hs.615803
Gene ExpressionLINC02258 [ NCBI-GEO ]   LINC02258 [ EBI - ARRAY_EXPRESS ]   LINC02258 [ SEEK ]   LINC02258 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02258 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)110806294
GTEX Portal (Tissue expression)LINC02258
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02258
DMDM Disease mutations110806294
Blocks (Seattle)LINC02258
Protein Interaction databases
BioGRIDLINC02258
STRING (EMBL)LINC02258
ZODIACLINC02258
Ontologies - Pathways
Huge Navigator LINC02258 [HugePedia]
snp3D : Map Gene to Disease110806294
BioCentury BCIQLINC02258
ClinGenLINC02258
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD110806294
Clinical trialLINC02258
Miscellaneous
canSAR (ICR)LINC02258 (select the gene name)
DataMed IndexLINC02258
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02258
EVEXLINC02258
GoPubMedLINC02258
iHOPLINC02258
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:38:24 CEST 2019

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