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LINC02465 (long intergenic non-protein coding RNA 2465)

Identity

Other alias-
HGNC (Hugo) LINC02465
LocusID (NCBI) 107986313
Atlas_Id 80508
Location 4q28.2  [Link to chromosome band 4q28]
Location_base_pair Starts at 129771619 and ends at 129955368 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02465   53403
Cards
Entrez_Gene (NCBI)LINC02465  107986313  long intergenic non-protein coding RNA 2465
Aliases
GeneCards (Weizmann)LINC02465
Ensembl hg19 (Hinxton)ENSG00000249618 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249618 [Gene_View]  ENSG00000249618 [Sequence]  chr4:129771619-129955368 [Contig_View]  LINC02465 [Vega]
ICGC DataPortalENSG00000249618
TCGA cBioPortalLINC02465
AceView (NCBI)LINC02465
Genatlas (Paris)LINC02465
WikiGenes107986313
SOURCE (Princeton)LINC02465
Genetics Home Reference (NIH)LINC02465
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02465  -     chr4:129771619-129955368 +  4q28.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02465  -     4q28.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC02465 - 4q28.2 [CytoView hg19]  LINC02465 - 4q28.2 [CytoView hg38]
ImmunoBaseENSG00000249618
Mapping of homologs : NCBILINC02465 [Mapview hg19]  LINC02465 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041448 HY050823
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02465
Cluster EST : UnigeneHs.112740 [ NCBI ]
CGAP (NCI)Hs.112740
Alternative Splicing GalleryENSG00000249618
Gene ExpressionLINC02465 [ NCBI-GEO ]   LINC02465 [ EBI - ARRAY_EXPRESS ]   LINC02465 [ SEEK ]   LINC02465 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02465 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107986313
GTEX Portal (Tissue expression)LINC02465
Human Protein AtlasENSG00000249618-LINC02465 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02465
DMDM Disease mutations107986313
Blocks (Seattle)LINC02465
Human Protein Atlas [tissue]ENSG00000249618-LINC02465 [tissue]
Protein Interaction databases
FunCoupENSG00000249618
BioGRIDLINC02465
STRING (EMBL)LINC02465
ZODIACLINC02465
Ontologies - Pathways
Huge Navigator LINC02465 [HugePedia]
snp3D : Map Gene to Disease107986313
BioCentury BCIQLINC02465
ClinGenLINC02465
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107986313
Clinical trialLINC02465
Miscellaneous
canSAR (ICR)LINC02465 (select the gene name)
DataMed IndexLINC02465
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02465
EVEXLINC02465
GoPubMedLINC02465
iHOPLINC02465
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:38:52 CEST 2019

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