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LINC02509 (long intergenic non-protein coding RNA 2509)

Identity

Other alias-
HGNC (Hugo) LINC02509
LocusID (NCBI) 105377556
Atlas_Id 80636
Location 4q34.3  [Link to chromosome band 4q34]
Location_base_pair Starts at 176875702 and ends at 176880600 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02509   53498
Cards
Entrez_Gene (NCBI)LINC02509  105377556  long intergenic non-protein coding RNA 2509
Aliases
GeneCards (Weizmann)LINC02509
Ensembl hg19 (Hinxton)ENSG00000250263 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250263 [Gene_View]  ENSG00000250263 [Sequence]  chr4:176875702-176880600 [Contig_View]  LINC02509 [Vega]
ICGC DataPortalENSG00000250263
TCGA cBioPortalLINC02509
AceView (NCBI)LINC02509
Genatlas (Paris)LINC02509
WikiGenes105377556
SOURCE (Princeton)LINC02509
Genetics Home Reference (NIH)LINC02509
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02509  -     chr4:176875702-176880600 +  4q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02509  -     4q34.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02509 - 4q34.3 [CytoView hg19]  LINC02509 - 4q34.3 [CytoView hg38]
ImmunoBaseENSG00000250263
Mapping of homologs : NCBILINC02509 [Mapview hg19]  LINC02509 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02509
Alternative Splicing GalleryENSG00000250263
Gene ExpressionLINC02509 [ NCBI-GEO ]   LINC02509 [ EBI - ARRAY_EXPRESS ]   LINC02509 [ SEEK ]   LINC02509 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02509 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377556
GTEX Portal (Tissue expression)LINC02509
Human Protein AtlasENSG00000250263-LINC02509 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02509
DMDM Disease mutations105377556
Blocks (Seattle)LINC02509
Human Protein Atlas [tissue]ENSG00000250263-LINC02509 [tissue]
Protein Interaction databases
FunCoupENSG00000250263
BioGRIDLINC02509
STRING (EMBL)LINC02509
ZODIACLINC02509
Ontologies - Pathways
Huge Navigator LINC02509 [HugePedia]
snp3D : Map Gene to Disease105377556
BioCentury BCIQLINC02509
ClinGenLINC02509
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377556
Clinical trialLINC02509
Miscellaneous
canSAR (ICR)LINC02509 (select the gene name)
DataMed IndexLINC02509
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02509
EVEXLINC02509
GoPubMedLINC02509
iHOPLINC02509
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:38:58 CEST 2019

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