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LINC02556 (long intergenic non-protein coding RNA 2556)

Identity

Other alias-
HGNC (Hugo) LINC02556
LocusID (NCBI) 102724679
Atlas_Id 80613
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23326616 and ends at 23328493 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02556   53595
Cards
Entrez_Gene (NCBI)LINC02556  102724679  long intergenic non-protein coding RNA 2556
Aliases
GeneCards (Weizmann)LINC02556
Ensembl hg19 (Hinxton)ENSG00000236611 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236611 [Gene_View]  ENSG00000236611 [Sequence]  chr22:23326616-23328493 [Contig_View]  LINC02556 [Vega]
ICGC DataPortalENSG00000236611
TCGA cBioPortalLINC02556
AceView (NCBI)LINC02556
Genatlas (Paris)LINC02556
WikiGenes102724679
SOURCE (Princeton)LINC02556
Genetics Home Reference (NIH)LINC02556
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02556  -     chr22:23326616-23328493 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02556  -     22q11.23   [Description]    (hg19-Feb_2009)
GoldenPathLINC02556 - 22q11.23 [CytoView hg19]  LINC02556 - 22q11.23 [CytoView hg38]
ImmunoBaseENSG00000236611
Mapping of homologs : NCBILINC02556 [Mapview hg19]  LINC02556 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI375037
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02556
Cluster EST : UnigeneHs.517462 [ NCBI ]
CGAP (NCI)Hs.517462
Alternative Splicing GalleryENSG00000236611
Gene ExpressionLINC02556 [ NCBI-GEO ]   LINC02556 [ EBI - ARRAY_EXPRESS ]   LINC02556 [ SEEK ]   LINC02556 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02556 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724679
GTEX Portal (Tissue expression)LINC02556
Human Protein AtlasENSG00000236611-LINC02556 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02556
DMDM Disease mutations102724679
Blocks (Seattle)LINC02556
Human Protein Atlas [tissue]ENSG00000236611-LINC02556 [tissue]
Protein Interaction databases
FunCoupENSG00000236611
BioGRIDLINC02556
STRING (EMBL)LINC02556
ZODIACLINC02556
Ontologies - Pathways
Huge Navigator LINC02556 [HugePedia]
snp3D : Map Gene to Disease102724679
BioCentury BCIQLINC02556
ClinGenLINC02556
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724679
Clinical trialLINC02556
Miscellaneous
canSAR (ICR)LINC02556 (select the gene name)
DataMed IndexLINC02556
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02556
EVEXLINC02556
GoPubMedLINC02556
iHOPLINC02556
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:39:06 CEST 2019

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