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LINC02560 (long intergenic non-protein coding RNA 2560)

Identity

Other alias-
HGNC (Hugo) LINC02560
LocusID (NCBI) 110806301
Atlas_Id 80476
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58400203 and ends at 58400679 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02560   53600
Cards
Entrez_Gene (NCBI)LINC02560  110806301  long intergenic non-protein coding RNA 2560
Aliases
GeneCards (Weizmann)LINC02560
Ensembl hg19 (Hinxton)ENSG00000268307 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268307 [Gene_View]  ENSG00000268307 [Sequence]  chr19:58400203-58400679 [Contig_View]  LINC02560 [Vega]
ICGC DataPortalENSG00000268307
TCGA cBioPortalLINC02560
AceView (NCBI)LINC02560
Genatlas (Paris)LINC02560
WikiGenes110806301
SOURCE (Princeton)LINC02560
Genetics Home Reference (NIH)LINC02560
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02560  -     chr19:58400203-58400679 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02560  -     19q13.43   [Description]    (hg19-Feb_2009)
GoldenPathLINC02560 - 19q13.43 [CytoView hg19]  LINC02560 - 19q13.43 [CytoView hg38]
ImmunoBaseENSG00000268307
Mapping of homologs : NCBILINC02560 [Mapview hg19]  LINC02560 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02560
Alternative Splicing GalleryENSG00000268307
Gene ExpressionLINC02560 [ NCBI-GEO ]   LINC02560 [ EBI - ARRAY_EXPRESS ]   LINC02560 [ SEEK ]   LINC02560 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02560 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)110806301
GTEX Portal (Tissue expression)LINC02560
Human Protein AtlasENSG00000268307-LINC02560 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02560
DMDM Disease mutations110806301
Blocks (Seattle)LINC02560
Human Protein Atlas [tissue]ENSG00000268307-LINC02560 [tissue]
Protein Interaction databases
FunCoupENSG00000268307
BioGRIDLINC02560
STRING (EMBL)LINC02560
ZODIACLINC02560
Ontologies - Pathways
Huge Navigator LINC02560 [HugePedia]
snp3D : Map Gene to Disease110806301
BioCentury BCIQLINC02560
ClinGenLINC02560
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD110806301
Clinical trialLINC02560
Miscellaneous
canSAR (ICR)LINC02560 (select the gene name)
DataMed IndexLINC02560
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02560
EVEXLINC02560
GoPubMedLINC02560
iHOPLINC02560
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:39:06 CEST 2019

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