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LINC02569 (long intergenic non-protein coding RNA 2569)

Identity

Other aliasTCONS_00011283
HGNC (Hugo) LINC02569
LocusID (NCBI) 111082993
Atlas_Id 80356
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30516266 and ends at 30519580 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02569   39760
Cards
Entrez_Gene (NCBI)LINC02569  111082993  long intergenic non-protein coding RNA 2569
AliasesTCONS_00011283
GeneCards (Weizmann)LINC02569
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:30516266-30519580 [Contig_View]  LINC02569 [Vega]
TCGA cBioPortalLINC02569
AceView (NCBI)LINC02569
Genatlas (Paris)LINC02569
WikiGenes111082993
SOURCE (Princeton)LINC02569
Genetics Home Reference (NIH)LINC02569
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02569  -     chr6:30516266-30519580 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02569  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathLINC02569 - 6p21.33 [CytoView hg19]  LINC02569 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBILINC02569 [Mapview hg19]  LINC02569 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ224945 BX102899 N29667
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LINC02569
Gene ExpressionLINC02569 [ NCBI-GEO ]   LINC02569 [ EBI - ARRAY_EXPRESS ]   LINC02569 [ SEEK ]   LINC02569 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02569 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)111082993
GTEX Portal (Tissue expression)LINC02569
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02569
DMDM Disease mutations111082993
Blocks (Seattle)LINC02569
Protein Interaction databases
BioGRIDLINC02569
STRING (EMBL)LINC02569
ZODIACLINC02569
Ontologies - Pathways
Huge Navigator LINC02569 [HugePedia]
snp3D : Map Gene to Disease111082993
BioCentury BCIQLINC02569
ClinGenLINC02569
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD111082993
Clinical trialLINC02569
Miscellaneous
canSAR (ICR)LINC02569 (select the gene name)
DataMed IndexLINC02569
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02569
EVEXLINC02569
GoPubMedLINC02569
iHOPLINC02569
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:39:08 CEST 2019

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