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LINC02575 (long intergenic non-protein coding RNA 2575)

Identity

Other alias-
HGNC (Hugo) LINC02575
LocusID (NCBI) 111216286
Atlas_Id 80378
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44485571 and ends at 44491142 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02575   53747
Cards
Entrez_Gene (NCBI)LINC02575  111216286  long intergenic non-protein coding RNA 2575
Aliases
GeneCards (Weizmann)LINC02575
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr21:44485571-44491142 [Contig_View]  LINC02575 [Vega]
TCGA cBioPortalLINC02575
AceView (NCBI)LINC02575
Genatlas (Paris)LINC02575
WikiGenes111216286
SOURCE (Princeton)LINC02575
Genetics Home Reference (NIH)LINC02575
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02575  -     chr21:44485571-44491142 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02575  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02575 - 21q22.3 [CytoView hg19]  LINC02575 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC02575 [Mapview hg19]  LINC02575 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057525
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02575
Cluster EST : UnigeneHs.572852 [ NCBI ]
CGAP (NCI)Hs.572852
Gene ExpressionLINC02575 [ NCBI-GEO ]   LINC02575 [ EBI - ARRAY_EXPRESS ]   LINC02575 [ SEEK ]   LINC02575 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02575 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)111216286
GTEX Portal (Tissue expression)LINC02575
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02575
DMDM Disease mutations111216286
Blocks (Seattle)LINC02575
Protein Interaction databases
BioGRIDLINC02575
STRING (EMBL)LINC02575
ZODIACLINC02575
Ontologies - Pathways
Huge Navigator LINC02575 [HugePedia]
snp3D : Map Gene to Disease111216286
BioCentury BCIQLINC02575
ClinGenLINC02575
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD111216286
Clinical trialLINC02575
Miscellaneous
canSAR (ICR)LINC02575 (select the gene name)
DataMed IndexLINC02575
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02575
EVEXLINC02575
GoPubMedLINC02575
iHOPLINC02575
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:39:09 CEST 2019

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