Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02595 (long intergenic non-protein coding RNA 2595)

Identity

Other alias-
HGNC (Hugo) LINC02595
LocusID (NCBI) 401585
Atlas_Id 80341
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 45848074 and ends at 45851490 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02595   53946
Cards
Entrez_Gene (NCBI)LINC02595  401585  long intergenic non-protein coding RNA 2595
Aliases
GeneCards (Weizmann)LINC02595
Ensembl hg19 (Hinxton)ENSG00000231566 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231566 [Gene_View]  ENSG00000231566 [Sequence]  chrX:45848074-45851490 [Contig_View]  LINC02595 [Vega]
ICGC DataPortalENSG00000231566
TCGA cBioPortalLINC02595
AceView (NCBI)LINC02595
Genatlas (Paris)LINC02595
WikiGenes401585
SOURCE (Princeton)LINC02595
Genetics Home Reference (NIH)LINC02595
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02595  -     chrX:45848074-45851490 -  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02595  -     Xp11.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02595 - Xp11.3 [CytoView hg19]  LINC02595 - Xp11.3 [CytoView hg38]
ImmunoBaseENSG00000231566
Mapping of homologs : NCBILINC02595 [Mapview hg19]  LINC02595 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI373927 AK098783
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02595
Cluster EST : UnigeneHs.633348 [ NCBI ]
CGAP (NCI)Hs.633348
Alternative Splicing GalleryENSG00000231566
Gene ExpressionLINC02595 [ NCBI-GEO ]   LINC02595 [ EBI - ARRAY_EXPRESS ]   LINC02595 [ SEEK ]   LINC02595 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02595 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401585
GTEX Portal (Tissue expression)LINC02595
Human Protein AtlasENSG00000231566-LINC02595 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02595
DMDM Disease mutations401585
Blocks (Seattle)LINC02595
Human Protein Atlas [tissue]ENSG00000231566-LINC02595 [tissue]
IPIIPI00981305   
Protein Interaction databases
FunCoupENSG00000231566
BioGRIDLINC02595
STRING (EMBL)LINC02595
ZODIACLINC02595
Ontologies - Pathways
Huge Navigator LINC02595 [HugePedia]
snp3D : Map Gene to Disease401585
BioCentury BCIQLINC02595
ClinGenLINC02595
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401585
Clinical trialLINC02595
Miscellaneous
canSAR (ICR)LINC02595 (select the gene name)
DataMed IndexLINC02595
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02595
EVEXLINC02595
GoPubMedLINC02595
iHOPLINC02595
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:39:11 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.