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LNCTAM34A (long non coding transcriptional activator of miR34a)

Identity

Other aliasGUARDIN
LINC01759
HGNC (Hugo) LNCTAM34A
LocusID (NCBI) 102724571
Atlas_Id 80337
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 9182204 and ends at 9192085 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LNCTAM34A   52548
Cards
Entrez_Gene (NCBI)LNCTAM34A  102724571  long non coding transcriptional activator of miR34a
AliasesGUARDIN; LINC01759
GeneCards (Weizmann)LNCTAM34A
Ensembl hg19 (Hinxton)ENSG00000234546 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234546 [Gene_View]  ENSG00000234546 [Sequence]  chr1:9182204-9192085 [Contig_View]  LNCTAM34A [Vega]
ICGC DataPortalENSG00000234546
TCGA cBioPortalLNCTAM34A
AceView (NCBI)LNCTAM34A
Genatlas (Paris)LNCTAM34A
WikiGenes102724571
SOURCE (Princeton)LNCTAM34A
Genetics Home Reference (NIH)LNCTAM34A
Genomic and cartography
GoldenPath hg38 (UCSC)LNCTAM34A  -     chr1:9182204-9192085 +  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LNCTAM34A  -     1p36.22   [Description]    (hg19-Feb_2009)
GoldenPathLNCTAM34A - 1p36.22 [CytoView hg19]  LNCTAM34A - 1p36.22 [CytoView hg38]
ImmunoBaseENSG00000234546
Mapping of homologs : NCBILNCTAM34A [Mapview hg19]  LNCTAM34A [Mapview hg38]
Gene and transcription
Genbank (Entrez)BP872819 EL952591
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LNCTAM34A
Cluster EST : UnigeneHs.695891 [ NCBI ]
CGAP (NCI)Hs.695891
Alternative Splicing GalleryENSG00000234546
Gene ExpressionLNCTAM34A [ NCBI-GEO ]   LNCTAM34A [ EBI - ARRAY_EXPRESS ]   LNCTAM34A [ SEEK ]   LNCTAM34A [ MEM ]
Gene Expression Viewer (FireBrowse)LNCTAM34A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724571
GTEX Portal (Tissue expression)LNCTAM34A
Human Protein AtlasENSG00000234546-LNCTAM34A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LNCTAM34A
DMDM Disease mutations102724571
Blocks (Seattle)LNCTAM34A
Human Protein Atlas [tissue]ENSG00000234546-LNCTAM34A [tissue]
Protein Interaction databases
FunCoupENSG00000234546
BioGRIDLNCTAM34A
STRING (EMBL)LNCTAM34A
ZODIACLNCTAM34A
Ontologies - Pathways
Huge Navigator LNCTAM34A [HugePedia]
snp3D : Map Gene to Disease102724571
BioCentury BCIQLNCTAM34A
ClinGenLNCTAM34A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724571
Clinical trialLNCTAM34A
Miscellaneous
canSAR (ICR)LNCTAM34A (select the gene name)
DataMed IndexLNCTAM34A
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLNCTAM34A
EVEXLNCTAM34A
GoPubMedLNCTAM34A
iHOPLNCTAM34A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:39:22 CEST 2019

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