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LOC102725072 (Putative uncharacterized protein DKFZp434K191)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 102725072
Atlas_Id 78580
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 18850118 and ends at 18861051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC102725072  102725072  Putative uncharacterized protein DKFZp434K191
Aliases
GeneCards (Weizmann)LOC102725072
Ensembl hg19 (Hinxton)ENSG00000161103 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000161103 [Gene_View]  ENSG00000161103 [Sequence]  chr22:18850118-18861051 [Contig_View]  LOC102725072 [Vega]
ICGC DataPortalENSG00000161103
TCGA cBioPortalLOC102725072
AceView (NCBI)LOC102725072
Genatlas (Paris)LOC102725072
WikiGenes102725072
SOURCE (Princeton)LOC102725072
Genetics Home Reference (NIH)LOC102725072
Genomic and cartography
GoldenPath hg38 (UCSC)LOC102725072  -     chr22:18850118-18861051 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC102725072  -     22q11.21   [Description]    (hg19-Feb_2009)
GoldenPathLOC102725072 - 22q11.21 [CytoView hg19]  LOC102725072 - 22q11.21 [CytoView hg38]
ImmunoBaseENSG00000161103
Mapping of homologs : NCBILOC102725072 [Mapview hg19]  LOC102725072 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL045321 BC051721
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC102725072
Cluster EST : UnigeneHs.745076 [ NCBI ]
CGAP (NCI)Hs.745076
Alternative Splicing GalleryENSG00000161103
Gene ExpressionLOC102725072 [ NCBI-GEO ]   LOC102725072 [ EBI - ARRAY_EXPRESS ]   LOC102725072 [ SEEK ]   LOC102725072 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC102725072 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102725072
GTEX Portal (Tissue expression)LOC102725072
Human Protein AtlasENSG00000161103-LOC102725072 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5BKY6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5BKY6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5BKY6
Splice isoforms : SwissVarQ5BKY6
PhosPhoSitePlusQ5BKY6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC102725072
DMDM Disease mutations102725072
Blocks (Seattle)LOC102725072
SuperfamilyQ5BKY6
Human Protein Atlas [tissue]ENSG00000161103-LOC102725072 [tissue]
Peptide AtlasQ5BKY6
Protein Interaction databases
DIP (DOE-UCLA)Q5BKY6
IntAct (EBI)Q5BKY6
FunCoupENSG00000161103
BioGRIDLOC102725072
STRING (EMBL)LOC102725072
ZODIACLOC102725072
Ontologies - Pathways
QuickGOQ5BKY6
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkLOC102725072
Atlas of Cancer Signalling NetworkLOC102725072
Wikipedia pathwaysLOC102725072
Orthology - Evolution
OrthoDB102725072
GeneTree (enSembl)ENSG00000161103
Phylogenetic Trees/Animal Genes : TreeFam-
HOGENOMQ5BKY6
Homologs : HomoloGeneLOC102725072
Homology/Alignments : Family Browser (UCSC)LOC102725072
Gene fusions - Rearrangements
Fusion : QuiverLOC102725072
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC102725072 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC102725072
dbVarLOC102725072
ClinVarLOC102725072
1000_GenomesLOC102725072 
Exome Variant ServerLOC102725072
ExAC (Exome Aggregation Consortium)ENSG00000161103
GNOMAD BrowserENSG00000161103
Varsome BrowserLOC102725072
Genetic variants : HAPMAP102725072
Genomic Variants (DGV)LOC102725072 [DGVbeta]
DECIPHERLOC102725072 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC102725072 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC102725072
DgiDB (Drug Gene Interaction Database)LOC102725072
DoCM (Curated mutations)LOC102725072 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC102725072 (select a term)
intoGenLOC102725072
Cancer3DLOC102725072(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETLOC102725072
MedgenLOC102725072
Genetic Testing Registry LOC102725072
NextProtQ5BKY6 [Medical]
TSGene102725072
GENETestsLOC102725072
Target ValidationLOC102725072
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease102725072
BioCentury BCIQLOC102725072
ClinGenLOC102725072
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102725072
Clinical trialLOC102725072
Miscellaneous
canSAR (ICR)LOC102725072 (select the gene name)
DataMed IndexLOC102725072
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC102725072
EVEXLOC102725072
GoPubMedLOC102725072
iHOPLOC102725072
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:46:03 CEST 2019

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