Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105374312 (uncharacterized LOC105374312)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105374312
Atlas_Id 80565
Location 3q21.2  [Link to chromosome band 3q21]
Location_base_pair Starts at 125774714 and ends at 125797953 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105374312  105374312  uncharacterized LOC105374312
Aliases
GeneCards (Weizmann)LOC105374312
Ensembl hg19 (Hinxton)ENSG00000272840 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272840 [Gene_View]  ENSG00000272840 [Sequence]  chr3:125774714-125797953 [Contig_View]  LOC105374312 [Vega]
ICGC DataPortalENSG00000272840
TCGA cBioPortalLOC105374312
AceView (NCBI)LOC105374312
Genatlas (Paris)LOC105374312
WikiGenes105374312
SOURCE (Princeton)LOC105374312
Genetics Home Reference (NIH)LOC105374312
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105374312  -     chr3:125774714-125797953 +  3q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105374312  -     3q21.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC105374312 - 3q21.2 [CytoView hg19]  LOC105374312 - 3q21.2 [CytoView hg38]
ImmunoBaseENSG00000272840
Mapping of homologs : NCBILOC105374312 [Mapview hg19]  LOC105374312 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF057812 BG216262
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NT_187537
Consensus coding sequences : CCDS (NCBI)LOC105374312
Cluster EST : UnigeneHs.637431 [ NCBI ]
CGAP (NCI)Hs.637431
Alternative Splicing GalleryENSG00000272840
Gene ExpressionLOC105374312 [ NCBI-GEO ]   LOC105374312 [ EBI - ARRAY_EXPRESS ]   LOC105374312 [ SEEK ]   LOC105374312 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105374312 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374312
GTEX Portal (Tissue expression)LOC105374312
Human Protein AtlasENSG00000272840-LOC105374312 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105374312
DMDM Disease mutations105374312
Blocks (Seattle)LOC105374312
Human Protein Atlas [tissue]ENSG00000272840-LOC105374312 [tissue]
Protein Interaction databases
FunCoupENSG00000272840
BioGRIDLOC105374312
STRING (EMBL)LOC105374312
ZODIACLOC105374312
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105374312
BioCentury BCIQLOC105374312
ClinGenLOC105374312
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374312
Clinical trialLOC105374312
Miscellaneous
canSAR (ICR)LOC105374312 (select the gene name)
DataMed IndexLOC105374312
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105374312
EVEXLOC105374312
GoPubMedLOC105374312
iHOPLOC105374312
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:47:12 CEST 2019

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