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LOC108783645 (HFE antisense RNA)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 108783645
Atlas_Id 78743
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26086290 and ends at 26091034 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC108783645  108783645  HFE antisense RNA
Aliases
GeneCards (Weizmann)LOC108783645
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:26086290-26091034 [Contig_View]  LOC108783645 [Vega]
TCGA cBioPortalLOC108783645
AceView (NCBI)LOC108783645
Genatlas (Paris)LOC108783645
WikiGenes108783645
SOURCE (Princeton)LOC108783645
Genetics Home Reference (NIH)LOC108783645
Genomic and cartography
GoldenPath hg38 (UCSC)LOC108783645  -     chr6:26086290-26091034 -  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC108783645  -     6p22.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC108783645 - 6p22.2 [CytoView hg19]  LOC108783645 - 6p22.2 [CytoView hg38]
Mapping of homologs : NCBILOC108783645 [Mapview hg19]  LOC108783645 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123489
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC108783645
Cluster EST : UnigeneHs.233325 [ NCBI ]
CGAP (NCI)Hs.233325
Gene ExpressionLOC108783645 [ NCBI-GEO ]   LOC108783645 [ EBI - ARRAY_EXPRESS ]   LOC108783645 [ SEEK ]   LOC108783645 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC108783645 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)108783645
GTEX Portal (Tissue expression)LOC108783645
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC108783645
DMDM Disease mutations108783645
Blocks (Seattle)LOC108783645
Protein Interaction databases
BioGRIDLOC108783645
STRING (EMBL)LOC108783645
ZODIACLOC108783645
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease108783645
BioCentury BCIQLOC108783645
ClinGenLOC108783645
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD108783645
Clinical trialLOC108783645
Miscellaneous
canSAR (ICR)LOC108783645 (select the gene name)
DataMed IndexLOC108783645
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC108783645
EVEXLOC108783645
GoPubMedLOC108783645
iHOPLOC108783645
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:48:18 CEST 2019

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