Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC642366 (uncharacterized LOC642366)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 642366
Atlas_Id 68284
Location 5q11.1  [Link to chromosome band 5q11]
Location_base_pair Starts at 51372737 and ends at 51383332 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC642366  642366  uncharacterized LOC642366
Aliases
GeneCards (Weizmann)LOC642366
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:51372737-51383332 [Contig_View]  LOC642366 [Vega]
TCGA cBioPortalLOC642366
AceView (NCBI)LOC642366
Genatlas (Paris)LOC642366
WikiGenes642366
SOURCE (Princeton)LOC642366
Genetics Home Reference (NIH)LOC642366
Genomic and cartography
GoldenPath hg38 (UCSC)LOC642366  -     chr5:51372737-51383332 -  5q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC642366  -     5q11.1   [Description]    (hg19-Feb_2009)
GoldenPathLOC642366 - 5q11.1 [CytoView hg19]  LOC642366 - 5q11.1 [CytoView hg38]
Mapping of homologs : NCBILOC642366 [Mapview hg19]  LOC642366 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CK902353 CR936786 DB039350
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC642366
Gene ExpressionLOC642366 [ NCBI-GEO ]   LOC642366 [ EBI - ARRAY_EXPRESS ]   LOC642366 [ SEEK ]   LOC642366 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC642366 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642366
GTEX Portal (Tissue expression)LOC642366
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC642366
DMDM Disease mutations642366
Blocks (Seattle)LOC642366
Protein Interaction databases
BioGRIDLOC642366
STRING (EMBL)LOC642366
ZODIACLOC642366
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease642366
BioCentury BCIQLOC642366
ClinGenLOC642366
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642366
Clinical trialLOC642366
Miscellaneous
canSAR (ICR)LOC642366 (select the gene name)
HarmonizomeLOC642366
DataMed IndexLOC642366
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC642366
EVEXLOC642366
GoPubMedLOC642366
iHOPLOC642366
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Mar 11 20:11:53 CET 2020
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