Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LRMP (lymphoid restricted membrane protein)

Identity

Alias_nameslymphoid-restricted membrane protein
Alias_symbol (synonym)JAW1
Other alias
HGNC (Hugo) LRMP
LocusID (NCBI) 4033
Atlas_Id 44024
Location 12p12.1  [Link to chromosome band 12p12]
Location_base_pair Starts at 25052247 and ends at 25108335 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LRMP (12p12.1) / BCL6 (3q27.3)LRMP (12p12.1) / MYC (8q24.21)LRMP (12p12.1) / SOX5 (12p12.1)
RERE (1p36.23) / LRMP (12p12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(3;12)(q27;p12) LRMP/BCL6
t(8;12)(q24;p12) LRMP/MYC


External links

Nomenclature
HGNC (Hugo)LRMP   6690
Cards
Entrez_Gene (NCBI)LRMP  4033  lymphoid restricted membrane protein
AliasesJAW1
GeneCards (Weizmann)LRMP
Ensembl hg19 (Hinxton)ENSG00000118308 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118308 [Gene_View]  ENSG00000118308 [Sequence]  chr12:25052247-25108335 [Contig_View]  LRMP [Vega]
ICGC DataPortalENSG00000118308
TCGA cBioPortalLRMP
AceView (NCBI)LRMP
Genatlas (Paris)LRMP
WikiGenes4033
SOURCE (Princeton)LRMP
Genetics Home Reference (NIH)LRMP
Genomic and cartography
GoldenPath hg38 (UCSC)LRMP  -     chr12:25052247-25108335 +  12p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRMP  -     12p12.1   [Description]    (hg19-Feb_2009)
GoldenPathLRMP - 12p12.1 [CytoView hg19]  LRMP - 12p12.1 [CytoView hg38]
ImmunoBaseENSG00000118308
Mapping of homologs : NCBILRMP [Mapview hg19]  LRMP [Mapview hg38]
OMIM602003   
Gene and transcription
Genbank (Entrez)AI949664 AK303103 AK303256 AW206014 AW408383
RefSeq transcript (Entrez)NM_001204126 NM_001204127 NM_001366540 NM_001366541 NM_001366542 NM_001366543 NM_001366544 NM_001366545 NM_001366546 NM_001366547 NM_001366548 NM_001366549 NM_006152
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRMP
Alternative Splicing GalleryENSG00000118308
Gene ExpressionLRMP [ NCBI-GEO ]   LRMP [ EBI - ARRAY_EXPRESS ]   LRMP [ SEEK ]   LRMP [ MEM ]
Gene Expression Viewer (FireBrowse)LRMP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)4033
GTEX Portal (Tissue expression)LRMP
Human Protein AtlasENSG00000118308-LRMP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRMP
DMDM Disease mutations4033
Blocks (Seattle)LRMP
Human Protein Atlas [tissue]ENSG00000118308-LRMP [tissue]
HPRD03593
IPIIPI00006158   IPI00477421   IPI01021749   IPI01022169   IPI01026206   IPI01026534   IPI01026436   IPI01025864   IPI01025712   IPI01025721   
Protein Interaction databases
FunCoupENSG00000118308
BioGRIDLRMP
STRING (EMBL)LRMP
ZODIACLRMP
Ontologies - Pathways
Huge Navigator LRMP [HugePedia]
snp3D : Map Gene to Disease4033
BioCentury BCIQLRMP
ClinGenLRMP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4033
Chemical/Pharm GKB GenePA30450
Clinical trialLRMP
Miscellaneous
canSAR (ICR)LRMP (select the gene name)
HarmonizomeLRMP
DataMed IndexLRMP
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRMP
EVEXLRMP
GoPubMedLRMP
iHOPLRMP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun May 10 12:21:12 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.